Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Cldn9Q9Z0S7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn9Q9Z0S7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn9Q9Z0S7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn9Q9Z0S7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.07■□□□□ 0.64
Cldn9Q9Z0S7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.07■□□□□ 0.64
Cldn9Q9Z0S7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cldn9Q9Z0S7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cldn9Q9Z0S7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn9Q9Z0S7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn9Q9Z0S7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn9Q9Z0S7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.06■□□□□ 0.64
Cldn9Q9Z0S7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn9Q9Z0S7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn9Q9Z0S7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn9Q9Z0S7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Cldn9Q9Z0S7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn9Q9Z0S7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cldn9Q9Z0S7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn9Q9Z0S7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn9Q9Z0S7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn9Q9Z0S7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn9Q9Z0S7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn9Q9Z0S7 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.05■□□□□ 0.64
Cldn9Q9Z0S7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cldn9Q9Z0S7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cldn9Q9Z0S7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn9Q9Z0S7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cldn9Q9Z0S7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cldn9Q9Z0S7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn9Q9Z0S7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Cldn9Q9Z0S7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn9Q9Z0S7 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.04■□□□□ 0.64
Cldn9Q9Z0S7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn9Q9Z0S7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn9Q9Z0S7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn9Q9Z0S7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn9Q9Z0S7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn9Q9Z0S7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn9Q9Z0S7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn9Q9Z0S7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn9Q9Z0S7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn9Q9Z0S7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn9Q9Z0S7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cldn9Q9Z0S7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn9Q9Z0S7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn9Q9Z0S7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Cldn9Q9Z0S7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cldn9Q9Z0S7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.03■□□□□ 0.64
Cldn9Q9Z0S7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cldn9Q9Z0S7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn9Q9Z0S7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.03■□□□□ 0.64
Cldn9Q9Z0S7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.03■□□□□ 0.64
Cldn9Q9Z0S7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.03■□□□□ 0.64
Cldn9Q9Z0S7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn9Q9Z0S7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn9Q9Z0S7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cldn9Q9Z0S7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.02■□□□□ 0.64
Cldn9Q9Z0S7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn9Q9Z0S7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn9Q9Z0S7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn9Q9Z0S7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn9Q9Z0S7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn9Q9Z0S7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn9Q9Z0S7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cldn9Q9Z0S7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn9Q9Z0S7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cldn9Q9Z0S7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn9Q9Z0S7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cldn9Q9Z0S7 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.02■□□□□ 0.64
Cldn9Q9Z0S7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cldn9Q9Z0S7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cldn9Q9Z0S7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cldn9Q9Z0S7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Cldn9Q9Z0S7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cldn9Q9Z0S7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Cldn9Q9Z0S7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldn9Q9Z0S7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.01■□□□□ 0.63
Cldn9Q9Z0S7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldn9Q9Z0S7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldn9Q9Z0S7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldn9Q9Z0S7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cldn9Q9Z0S7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cldn9Q9Z0S7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Cldn9Q9Z0S7 Gm27045-201ENSMUST00000182145 1402 ntBASIC19■□□□□ 0.63
Cldn9Q9Z0S7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn9Q9Z0S7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn9Q9Z0S7 Gm12922-201ENSMUST00000120626 809 ntBASIC19■□□□□ 0.63
Cldn9Q9Z0S7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19■□□□□ 0.63
Cldn9Q9Z0S7 Golgb1-201ENSMUST00000023534 498 ntBASIC19■□□□□ 0.63
Cldn9Q9Z0S7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn9Q9Z0S7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19■□□□□ 0.63
Cldn9Q9Z0S7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cldn9Q9Z0S7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn9Q9Z0S7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cldn9Q9Z0S7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn9Q9Z0S7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn9Q9Z0S7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn9Q9Z0S7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn9Q9Z0S7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms