Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcb1Q9Z0H3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcb1Q9Z0H3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcb1Q9Z0H3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcb1Q9Z0H3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcb1Q9Z0H3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcb1Q9Z0H3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.62■□□□□ 0.89
Smarcb1Q9Z0H3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcb1Q9Z0H3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.62■□□□□ 0.89
Smarcb1Q9Z0H3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcb1Q9Z0H3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Smarcb1Q9Z0H3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcb1Q9Z0H3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.62■□□□□ 0.89
Smarcb1Q9Z0H3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.62■□□□□ 0.89
Smarcb1Q9Z0H3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Smarcb1Q9Z0H3 Gm27801-201ENSMUST00000184174 223 ntBASIC20.62■□□□□ 0.89
Smarcb1Q9Z0H3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcb1Q9Z0H3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcb1Q9Z0H3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcb1Q9Z0H3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcb1Q9Z0H3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcb1Q9Z0H3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcb1Q9Z0H3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcb1Q9Z0H3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcb1Q9Z0H3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcb1Q9Z0H3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcb1Q9Z0H3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcb1Q9Z0H3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Smarcb1Q9Z0H3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Smarcb1Q9Z0H3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.61■□□□□ 0.89
Smarcb1Q9Z0H3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcb1Q9Z0H3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcb1Q9Z0H3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Smarcb1Q9Z0H3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcb1Q9Z0H3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcb1Q9Z0H3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcb1Q9Z0H3 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.6■□□□□ 0.89
Smarcb1Q9Z0H3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcb1Q9Z0H3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcb1Q9Z0H3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcb1Q9Z0H3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcb1Q9Z0H3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcb1Q9Z0H3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcb1Q9Z0H3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcb1Q9Z0H3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Smarcb1Q9Z0H3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcb1Q9Z0H3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.59■□□□□ 0.89
Smarcb1Q9Z0H3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcb1Q9Z0H3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcb1Q9Z0H3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.59■□□□□ 0.89
Smarcb1Q9Z0H3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcb1Q9Z0H3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcb1Q9Z0H3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcb1Q9Z0H3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.58■□□□□ 0.89
Smarcb1Q9Z0H3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcb1Q9Z0H3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcb1Q9Z0H3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcb1Q9Z0H3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcb1Q9Z0H3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcb1Q9Z0H3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcb1Q9Z0H3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcb1Q9Z0H3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smarcb1Q9Z0H3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.58■□□□□ 0.88
Smarcb1Q9Z0H3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Smarcb1Q9Z0H3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.58■□□□□ 0.88
Smarcb1Q9Z0H3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcb1Q9Z0H3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcb1Q9Z0H3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcb1Q9Z0H3 Gm10849-201ENSMUST00000100397 618 ntBASIC20.57■□□□□ 0.88
Smarcb1Q9Z0H3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcb1Q9Z0H3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcb1Q9Z0H3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcb1Q9Z0H3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcb1Q9Z0H3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Smarcb1Q9Z0H3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.56■□□□□ 0.88
Smarcb1Q9Z0H3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcb1Q9Z0H3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcb1Q9Z0H3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcb1Q9Z0H3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Smarcb1Q9Z0H3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcb1Q9Z0H3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcb1Q9Z0H3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcb1Q9Z0H3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcb1Q9Z0H3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcb1Q9Z0H3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcb1Q9Z0H3 Gm42778-201ENSMUST00000199644 553 ntBASIC20.55■□□□□ 0.88
Smarcb1Q9Z0H3 Gm18671-201ENSMUST00000214826 683 ntBASIC20.55■□□□□ 0.88
Smarcb1Q9Z0H3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcb1Q9Z0H3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.55■□□□□ 0.88
Smarcb1Q9Z0H3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Smarcb1Q9Z0H3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Smarcb1Q9Z0H3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcb1Q9Z0H3 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.54■□□□□ 0.88
Smarcb1Q9Z0H3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcb1Q9Z0H3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.54■□□□□ 0.88
Smarcb1Q9Z0H3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.54■□□□□ 0.88
Smarcb1Q9Z0H3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcb1Q9Z0H3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcb1Q9Z0H3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.54■□□□□ 0.88
Smarcb1Q9Z0H3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms