Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClcnkaQ9WUB7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ClcnkaQ9WUB7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ClcnkaQ9WUB7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ClcnkaQ9WUB7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ClcnkaQ9WUB7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ClcnkaQ9WUB7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ClcnkaQ9WUB7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ClcnkaQ9WUB7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ClcnkaQ9WUB7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.21■□□□□ 0.51
ClcnkaQ9WUB7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ClcnkaQ9WUB7 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.2■□□□□ 0.5
ClcnkaQ9WUB7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClcnkaQ9WUB7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClcnkaQ9WUB7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClcnkaQ9WUB7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClcnkaQ9WUB7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClcnkaQ9WUB7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ClcnkaQ9WUB7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClcnkaQ9WUB7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClcnkaQ9WUB7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.2■□□□□ 0.5
ClcnkaQ9WUB7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ClcnkaQ9WUB7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ClcnkaQ9WUB7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ClcnkaQ9WUB7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ClcnkaQ9WUB7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
ClcnkaQ9WUB7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ClcnkaQ9WUB7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ClcnkaQ9WUB7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ClcnkaQ9WUB7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ClcnkaQ9WUB7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ClcnkaQ9WUB7 Gm9847-201ENSMUST00000052528 599 ntBASIC18.19■□□□□ 0.5
ClcnkaQ9WUB7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ClcnkaQ9WUB7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.19■□□□□ 0.5
ClcnkaQ9WUB7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ClcnkaQ9WUB7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ClcnkaQ9WUB7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ClcnkaQ9WUB7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ClcnkaQ9WUB7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ClcnkaQ9WUB7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ClcnkaQ9WUB7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ClcnkaQ9WUB7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ClcnkaQ9WUB7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
ClcnkaQ9WUB7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ClcnkaQ9WUB7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.18■□□□□ 0.5
ClcnkaQ9WUB7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.18■□□□□ 0.5
ClcnkaQ9WUB7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ClcnkaQ9WUB7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ClcnkaQ9WUB7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ClcnkaQ9WUB7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ClcnkaQ9WUB7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ClcnkaQ9WUB7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ClcnkaQ9WUB7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ClcnkaQ9WUB7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ClcnkaQ9WUB7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ClcnkaQ9WUB7 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.16■□□□□ 0.5
ClcnkaQ9WUB7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ClcnkaQ9WUB7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ClcnkaQ9WUB7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ClcnkaQ9WUB7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ClcnkaQ9WUB7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ClcnkaQ9WUB7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ClcnkaQ9WUB7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.15■□□□□ 0.5
ClcnkaQ9WUB7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ClcnkaQ9WUB7 Mir6236-201ENSMUST00000184437 123 ntBASIC18.15■□□□□ 0.5
ClcnkaQ9WUB7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ClcnkaQ9WUB7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ClcnkaQ9WUB7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
ClcnkaQ9WUB7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ClcnkaQ9WUB7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ClcnkaQ9WUB7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClcnkaQ9WUB7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
ClcnkaQ9WUB7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClcnkaQ9WUB7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClcnkaQ9WUB7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClcnkaQ9WUB7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.14■□□□□ 0.49
ClcnkaQ9WUB7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClcnkaQ9WUB7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ClcnkaQ9WUB7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClcnkaQ9WUB7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClcnkaQ9WUB7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClcnkaQ9WUB7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClcnkaQ9WUB7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClcnkaQ9WUB7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.13■□□□□ 0.49
ClcnkaQ9WUB7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClcnkaQ9WUB7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClcnkaQ9WUB7 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.13■□□□□ 0.49
ClcnkaQ9WUB7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClcnkaQ9WUB7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClcnkaQ9WUB7 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.13■□□□□ 0.49
ClcnkaQ9WUB7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClcnkaQ9WUB7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClcnkaQ9WUB7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClcnkaQ9WUB7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
ClcnkaQ9WUB7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ClcnkaQ9WUB7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClcnkaQ9WUB7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.13■□□□□ 0.49
ClcnkaQ9WUB7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ClcnkaQ9WUB7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClcnkaQ9WUB7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms