Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.24■□□□□ 0.35
Nubp1Q9R060 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nubp1Q9R060 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Nubp1Q9R060 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.24■□□□□ 0.35
Nubp1Q9R060 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.24■□□□□ 0.35
Nubp1Q9R060 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nubp1Q9R060 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Nubp1Q9R060 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nubp1Q9R060 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp1Q9R060 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp1Q9R060 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Nubp1Q9R060 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp1Q9R060 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.23■□□□□ 0.35
Nubp1Q9R060 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp1Q9R060 Gm13234-201ENSMUST00000120010 747 ntBASIC17.23■□□□□ 0.35
Nubp1Q9R060 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.23■□□□□ 0.35
Nubp1Q9R060 Gm8520-201ENSMUST00000186517 868 ntBASIC17.23■□□□□ 0.35
Nubp1Q9R060 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nubp1Q9R060 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp1Q9R060 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp1Q9R060 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp1Q9R060 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.23■□□□□ 0.35
Nubp1Q9R060 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Nubp1Q9R060 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp1Q9R060 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp1Q9R060 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nubp1Q9R060 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Nubp1Q9R060 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nubp1Q9R060 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nubp1Q9R060 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nubp1Q9R060 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nubp1Q9R060 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Nubp1Q9R060 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.22■□□□□ 0.35
Nubp1Q9R060 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nubp1Q9R060 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.22■□□□□ 0.35
Nubp1Q9R060 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.22■□□□□ 0.35
Nubp1Q9R060 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nubp1Q9R060 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nubp1Q9R060 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nubp1Q9R060 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nubp1Q9R060 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Nubp1Q9R060 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nubp1Q9R060 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nubp1Q9R060 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.21■□□□□ 0.35
Nubp1Q9R060 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Nubp1Q9R060 Gm22325-201ENSMUST00000158904 308 ntBASIC17.21■□□□□ 0.35
Nubp1Q9R060 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nubp1Q9R060 Gm9988-201ENSMUST00000069786 435 ntBASIC17.21■□□□□ 0.35
Nubp1Q9R060 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nubp1Q9R060 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nubp1Q9R060 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Nubp1Q9R060 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Nubp1Q9R060 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.21■□□□□ 0.34
Nubp1Q9R060 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nubp1Q9R060 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nubp1Q9R060 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nubp1Q9R060 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nubp1Q9R060 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.2■□□□□ 0.34
Nubp1Q9R060 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nubp1Q9R060 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nubp1Q9R060 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Nubp1Q9R060 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nubp1Q9R060 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Nubp1Q9R060 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nubp1Q9R060 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Nubp1Q9R060 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.2■□□□□ 0.34
Nubp1Q9R060 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nubp1Q9R060 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nubp1Q9R060 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nubp1Q9R060 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nubp1Q9R060 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Nubp1Q9R060 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.19■□□□□ 0.34
Nubp1Q9R060 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC17.19■□□□□ 0.34
Nubp1Q9R060 Mir5133-201ENSMUST00000174955 77 ntBASIC17.19■□□□□ 0.34
Nubp1Q9R060 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nubp1Q9R060 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nubp1Q9R060 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nubp1Q9R060 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nubp1Q9R060 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nubp1Q9R060 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nubp1Q9R060 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.19■□□□□ 0.34
Nubp1Q9R060 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nubp1Q9R060 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nubp1Q9R060 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nubp1Q9R060 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nubp1Q9R060 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nubp1Q9R060 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.18■□□□□ 0.34
Nubp1Q9R060 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.18■□□□□ 0.34
Nubp1Q9R060 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.18■□□□□ 0.34
Nubp1Q9R060 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nubp1Q9R060 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nubp1Q9R060 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.18■□□□□ 0.34
Nubp1Q9R060 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nubp1Q9R060 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nubp1Q9R060 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.17■□□□□ 0.34
Nubp1Q9R060 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.17■□□□□ 0.34
Nubp1Q9R060 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.17■□□□□ 0.34
Nubp1Q9R060 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nubp1Q9R060 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nubp1Q9R060 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms