Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Shroom3Q9QXN0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shroom3Q9QXN0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shroom3Q9QXN0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Shroom3Q9QXN0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom3Q9QXN0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom3Q9QXN0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom3Q9QXN0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.96■□□□□ 0.79
Shroom3Q9QXN0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom3Q9QXN0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Shroom3Q9QXN0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom3Q9QXN0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Shroom3Q9QXN0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.96■□□□□ 0.79
Shroom3Q9QXN0 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.96■□□□□ 0.79
Shroom3Q9QXN0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shroom3Q9QXN0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shroom3Q9QXN0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Shroom3Q9QXN0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shroom3Q9QXN0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.95■□□□□ 0.78
Shroom3Q9QXN0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.95■□□□□ 0.78
Shroom3Q9QXN0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shroom3Q9QXN0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shroom3Q9QXN0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Shroom3Q9QXN0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.94■□□□□ 0.78
Shroom3Q9QXN0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Shroom3Q9QXN0 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.94■□□□□ 0.78
Shroom3Q9QXN0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shroom3Q9QXN0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shroom3Q9QXN0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shroom3Q9QXN0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
Shroom3Q9QXN0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
Shroom3Q9QXN0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Shroom3Q9QXN0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shroom3Q9QXN0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shroom3Q9QXN0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Shroom3Q9QXN0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shroom3Q9QXN0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shroom3Q9QXN0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shroom3Q9QXN0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shroom3Q9QXN0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shroom3Q9QXN0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shroom3Q9QXN0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Shroom3Q9QXN0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shroom3Q9QXN0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shroom3Q9QXN0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shroom3Q9QXN0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Shroom3Q9QXN0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
Shroom3Q9QXN0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shroom3Q9QXN0 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.92■□□□□ 0.78
Shroom3Q9QXN0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shroom3Q9QXN0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shroom3Q9QXN0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shroom3Q9QXN0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.91■□□□□ 0.78
Shroom3Q9QXN0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Shroom3Q9QXN0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shroom3Q9QXN0 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.91■□□□□ 0.78
Shroom3Q9QXN0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Shroom3Q9QXN0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shroom3Q9QXN0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shroom3Q9QXN0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.91■□□□□ 0.78
Shroom3Q9QXN0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shroom3Q9QXN0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Shroom3Q9QXN0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.9■□□□□ 0.78
Shroom3Q9QXN0 Mir6236-201ENSMUST00000184437 123 ntBASIC19.9■□□□□ 0.78
Shroom3Q9QXN0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
Shroom3Q9QXN0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shroom3Q9QXN0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shroom3Q9QXN0 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.9■□□□□ 0.78
Shroom3Q9QXN0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shroom3Q9QXN0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Shroom3Q9QXN0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Shroom3Q9QXN0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shroom3Q9QXN0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.9■□□□□ 0.78
Shroom3Q9QXN0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shroom3Q9QXN0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Shroom3Q9QXN0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.89■□□□□ 0.77
Shroom3Q9QXN0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Shroom3Q9QXN0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom3Q9QXN0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom3Q9QXN0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom3Q9QXN0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom3Q9QXN0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shroom3Q9QXN0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shroom3Q9QXN0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shroom3Q9QXN0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Shroom3Q9QXN0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.88■□□□□ 0.77
Shroom3Q9QXN0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shroom3Q9QXN0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shroom3Q9QXN0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Shroom3Q9QXN0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shroom3Q9QXN0 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.88■□□□□ 0.77
Shroom3Q9QXN0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Shroom3Q9QXN0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shroom3Q9QXN0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shroom3Q9QXN0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Shroom3Q9QXN0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shroom3Q9QXN0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Shroom3Q9QXN0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shroom3Q9QXN0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Shroom3Q9QXN0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms