Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zc3h8Q9JJ48 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Zc3h8Q9JJ48 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Zc3h8Q9JJ48 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.42■□□□□ 0.54
Zc3h8Q9JJ48 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Zc3h8Q9JJ48 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zc3h8Q9JJ48 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zc3h8Q9JJ48 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zc3h8Q9JJ48 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Zc3h8Q9JJ48 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Zc3h8Q9JJ48 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zc3h8Q9JJ48 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zc3h8Q9JJ48 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Zc3h8Q9JJ48 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zc3h8Q9JJ48 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Zc3h8Q9JJ48 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zc3h8Q9JJ48 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Zc3h8Q9JJ48 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zc3h8Q9JJ48 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zc3h8Q9JJ48 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Zc3h8Q9JJ48 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zc3h8Q9JJ48 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.4■□□□□ 0.54
Zc3h8Q9JJ48 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zc3h8Q9JJ48 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Zc3h8Q9JJ48 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Zc3h8Q9JJ48 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zc3h8Q9JJ48 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zc3h8Q9JJ48 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Zc3h8Q9JJ48 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zc3h8Q9JJ48 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Zc3h8Q9JJ48 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.39■□□□□ 0.53
Zc3h8Q9JJ48 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zc3h8Q9JJ48 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zc3h8Q9JJ48 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Zc3h8Q9JJ48 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zc3h8Q9JJ48 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zc3h8Q9JJ48 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Zc3h8Q9JJ48 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zc3h8Q9JJ48 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.39■□□□□ 0.53
Zc3h8Q9JJ48 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zc3h8Q9JJ48 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.38■□□□□ 0.53
Zc3h8Q9JJ48 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zc3h8Q9JJ48 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.38■□□□□ 0.53
Zc3h8Q9JJ48 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.38■□□□□ 0.53
Zc3h8Q9JJ48 Smad6-203ENSMUST00000179458 273 ntBASIC18.38■□□□□ 0.53
Zc3h8Q9JJ48 Gm26833-201ENSMUST00000180899 440 ntBASIC18.38■□□□□ 0.53
Zc3h8Q9JJ48 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zc3h8Q9JJ48 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zc3h8Q9JJ48 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.38■□□□□ 0.53
Zc3h8Q9JJ48 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Zc3h8Q9JJ48 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zc3h8Q9JJ48 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.38■□□□□ 0.53
Zc3h8Q9JJ48 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zc3h8Q9JJ48 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Zc3h8Q9JJ48 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
Zc3h8Q9JJ48 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3h8Q9JJ48 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3h8Q9JJ48 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3h8Q9JJ48 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Zc3h8Q9JJ48 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
Zc3h8Q9JJ48 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3h8Q9JJ48 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3h8Q9JJ48 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3h8Q9JJ48 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Zc3h8Q9JJ48 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3h8Q9JJ48 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.37■□□□□ 0.53
Zc3h8Q9JJ48 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.36■□□□□ 0.53
Zc3h8Q9JJ48 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Zc3h8Q9JJ48 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.36■□□□□ 0.53
Zc3h8Q9JJ48 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.36■□□□□ 0.53
Zc3h8Q9JJ48 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3h8Q9JJ48 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3h8Q9JJ48 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3h8Q9JJ48 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3h8Q9JJ48 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3h8Q9JJ48 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3h8Q9JJ48 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3h8Q9JJ48 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.35■□□□□ 0.53
Zc3h8Q9JJ48 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3h8Q9JJ48 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3h8Q9JJ48 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.35■□□□□ 0.53
Zc3h8Q9JJ48 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3h8Q9JJ48 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Zc3h8Q9JJ48 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Zc3h8Q9JJ48 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.35■□□□□ 0.53
Zc3h8Q9JJ48 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Zc3h8Q9JJ48 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3h8Q9JJ48 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.35■□□□□ 0.53
Zc3h8Q9JJ48 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.34■□□□□ 0.53
Zc3h8Q9JJ48 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Zc3h8Q9JJ48 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3h8Q9JJ48 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Zc3h8Q9JJ48 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3h8Q9JJ48 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3h8Q9JJ48 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Zc3h8Q9JJ48 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3h8Q9JJ48 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3h8Q9JJ48 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3h8Q9JJ48 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3h8Q9JJ48 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms