Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps35Q9EQH3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps35Q9EQH3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps35Q9EQH3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps35Q9EQH3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps35Q9EQH3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps35Q9EQH3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps35Q9EQH3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps35Q9EQH3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps35Q9EQH3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps35Q9EQH3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.78■□□□□ 0.76
Vps35Q9EQH3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.78■□□□□ 0.76
Vps35Q9EQH3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps35Q9EQH3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps35Q9EQH3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps35Q9EQH3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps35Q9EQH3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps35Q9EQH3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps35Q9EQH3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps35Q9EQH3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Vps35Q9EQH3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps35Q9EQH3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Vps35Q9EQH3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Vps35Q9EQH3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.77■□□□□ 0.76
Vps35Q9EQH3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps35Q9EQH3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps35Q9EQH3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps35Q9EQH3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vps35Q9EQH3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vps35Q9EQH3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vps35Q9EQH3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Vps35Q9EQH3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps35Q9EQH3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.76■□□□□ 0.75
Vps35Q9EQH3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.76■□□□□ 0.75
Vps35Q9EQH3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps35Q9EQH3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Vps35Q9EQH3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.76■□□□□ 0.75
Vps35Q9EQH3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
Vps35Q9EQH3 Gm27454-201ENSMUST00000185090 204 ntBASIC19.76■□□□□ 0.75
Vps35Q9EQH3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps35Q9EQH3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
Vps35Q9EQH3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps35Q9EQH3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Vps35Q9EQH3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps35Q9EQH3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Vps35Q9EQH3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps35Q9EQH3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.75■□□□□ 0.75
Vps35Q9EQH3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps35Q9EQH3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Vps35Q9EQH3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps35Q9EQH3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps35Q9EQH3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps35Q9EQH3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vps35Q9EQH3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vps35Q9EQH3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.75■□□□□ 0.75
Vps35Q9EQH3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps35Q9EQH3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Vps35Q9EQH3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Vps35Q9EQH3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps35Q9EQH3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps35Q9EQH3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps35Q9EQH3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps35Q9EQH3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Vps35Q9EQH3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.74■□□□□ 0.75
Vps35Q9EQH3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.74■□□□□ 0.75
Vps35Q9EQH3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.74■□□□□ 0.75
Vps35Q9EQH3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.74■□□□□ 0.75
Vps35Q9EQH3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.74■□□□□ 0.75
Vps35Q9EQH3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.74■□□□□ 0.75
Vps35Q9EQH3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps35Q9EQH3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps35Q9EQH3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Vps35Q9EQH3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps35Q9EQH3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps35Q9EQH3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps35Q9EQH3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps35Q9EQH3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps35Q9EQH3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps35Q9EQH3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Vps35Q9EQH3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps35Q9EQH3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps35Q9EQH3 Gm43137-201ENSMUST00000198052 594 ntBASIC19.73■□□□□ 0.75
Vps35Q9EQH3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps35Q9EQH3 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.73■□□□□ 0.75
Vps35Q9EQH3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps35Q9EQH3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps35Q9EQH3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps35Q9EQH3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps35Q9EQH3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps35Q9EQH3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps35Q9EQH3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps35Q9EQH3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps35Q9EQH3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps35Q9EQH3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Vps35Q9EQH3 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.72■□□□□ 0.75
Vps35Q9EQH3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps35Q9EQH3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Vps35Q9EQH3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps35Q9EQH3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps35Q9EQH3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms