Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nif3l1Q9EQ80 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nif3l1Q9EQ80 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nif3l1Q9EQ80 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Nif3l1Q9EQ80 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nif3l1Q9EQ80 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nif3l1Q9EQ80 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nif3l1Q9EQ80 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.68■□□□□ 0.74
Nif3l1Q9EQ80 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.68■□□□□ 0.74
Nif3l1Q9EQ80 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nif3l1Q9EQ80 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nif3l1Q9EQ80 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nif3l1Q9EQ80 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nif3l1Q9EQ80 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nif3l1Q9EQ80 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nif3l1Q9EQ80 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nif3l1Q9EQ80 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nif3l1Q9EQ80 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.67■□□□□ 0.74
Nif3l1Q9EQ80 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nif3l1Q9EQ80 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nif3l1Q9EQ80 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nif3l1Q9EQ80 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nif3l1Q9EQ80 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nif3l1Q9EQ80 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nif3l1Q9EQ80 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nif3l1Q9EQ80 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nif3l1Q9EQ80 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nif3l1Q9EQ80 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nif3l1Q9EQ80 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Nif3l1Q9EQ80 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nif3l1Q9EQ80 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
Nif3l1Q9EQ80 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nif3l1Q9EQ80 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Nif3l1Q9EQ80 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nif3l1Q9EQ80 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.66■□□□□ 0.74
Nif3l1Q9EQ80 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nif3l1Q9EQ80 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nif3l1Q9EQ80 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.66■□□□□ 0.74
Nif3l1Q9EQ80 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.66■□□□□ 0.74
Nif3l1Q9EQ80 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.66■□□□□ 0.74
Nif3l1Q9EQ80 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nif3l1Q9EQ80 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nif3l1Q9EQ80 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nif3l1Q9EQ80 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.65■□□□□ 0.74
Nif3l1Q9EQ80 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nif3l1Q9EQ80 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Nif3l1Q9EQ80 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.65■□□□□ 0.74
Nif3l1Q9EQ80 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.65■□□□□ 0.74
Nif3l1Q9EQ80 Gm43137-201ENSMUST00000198052 594 ntBASIC19.65■□□□□ 0.74
Nif3l1Q9EQ80 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nif3l1Q9EQ80 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.65■□□□□ 0.74
Nif3l1Q9EQ80 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nif3l1Q9EQ80 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nif3l1Q9EQ80 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Nif3l1Q9EQ80 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nif3l1Q9EQ80 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Nif3l1Q9EQ80 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nif3l1Q9EQ80 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nif3l1Q9EQ80 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.64■□□□□ 0.73
Nif3l1Q9EQ80 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Nif3l1Q9EQ80 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nif3l1Q9EQ80 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nif3l1Q9EQ80 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.64■□□□□ 0.73
Nif3l1Q9EQ80 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nif3l1Q9EQ80 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nif3l1Q9EQ80 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nif3l1Q9EQ80 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.63■□□□□ 0.73
Nif3l1Q9EQ80 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nif3l1Q9EQ80 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
Nif3l1Q9EQ80 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Nif3l1Q9EQ80 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nif3l1Q9EQ80 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nif3l1Q9EQ80 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Nif3l1Q9EQ80 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nif3l1Q9EQ80 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nif3l1Q9EQ80 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nif3l1Q9EQ80 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nif3l1Q9EQ80 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nif3l1Q9EQ80 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nif3l1Q9EQ80 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nif3l1Q9EQ80 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nif3l1Q9EQ80 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nif3l1Q9EQ80 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.61■□□□□ 0.73
Nif3l1Q9EQ80 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nif3l1Q9EQ80 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nif3l1Q9EQ80 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nif3l1Q9EQ80 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nif3l1Q9EQ80 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nif3l1Q9EQ80 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nif3l1Q9EQ80 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nif3l1Q9EQ80 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nif3l1Q9EQ80 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nif3l1Q9EQ80 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nif3l1Q9EQ80 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nif3l1Q9EQ80 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nif3l1Q9EQ80 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Nif3l1Q9EQ80 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nif3l1Q9EQ80 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nif3l1Q9EQ80 Gm12821-201ENSMUST00000120022 600 ntBASIC19.6■□□□□ 0.73
Nif3l1Q9EQ80 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms