Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ssmem1Q9D9Y8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.12■□□□□ 0.33
Ssmem1Q9D9Y8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssmem1Q9D9Y8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssmem1Q9D9Y8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssmem1Q9D9Y8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssmem1Q9D9Y8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ssmem1Q9D9Y8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ssmem1Q9D9Y8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ssmem1Q9D9Y8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.11■□□□□ 0.33
Ssmem1Q9D9Y8 Serp2-204ENSMUST00000228055 705 ntBASIC17.11■□□□□ 0.33
Ssmem1Q9D9Y8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssmem1Q9D9Y8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.11■□□□□ 0.33
Ssmem1Q9D9Y8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.11■□□□□ 0.33
Ssmem1Q9D9Y8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssmem1Q9D9Y8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssmem1Q9D9Y8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssmem1Q9D9Y8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ssmem1Q9D9Y8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssmem1Q9D9Y8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.1■□□□□ 0.33
Ssmem1Q9D9Y8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ssmem1Q9D9Y8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Ssmem1Q9D9Y8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ssmem1Q9D9Y8 Gm43017-201ENSMUST00000198296 752 ntBASIC17.1■□□□□ 0.33
Ssmem1Q9D9Y8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssmem1Q9D9Y8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssmem1Q9D9Y8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ssmem1Q9D9Y8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssmem1Q9D9Y8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.1■□□□□ 0.33
Ssmem1Q9D9Y8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssmem1Q9D9Y8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ssmem1Q9D9Y8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssmem1Q9D9Y8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssmem1Q9D9Y8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ssmem1Q9D9Y8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssmem1Q9D9Y8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssmem1Q9D9Y8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssmem1Q9D9Y8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssmem1Q9D9Y8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssmem1Q9D9Y8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.09■□□□□ 0.33
Ssmem1Q9D9Y8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssmem1Q9D9Y8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.09■□□□□ 0.33
Ssmem1Q9D9Y8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.09■□□□□ 0.33
Ssmem1Q9D9Y8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.09■□□□□ 0.33
Ssmem1Q9D9Y8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssmem1Q9D9Y8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Ssmem1Q9D9Y8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssmem1Q9D9Y8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssmem1Q9D9Y8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssmem1Q9D9Y8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Ssmem1Q9D9Y8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Ssmem1Q9D9Y8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ssmem1Q9D9Y8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.08■□□□□ 0.33
Ssmem1Q9D9Y8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.08■□□□□ 0.33
Ssmem1Q9D9Y8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ssmem1Q9D9Y8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ssmem1Q9D9Y8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssmem1Q9D9Y8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssmem1Q9D9Y8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.08■□□□□ 0.32
Ssmem1Q9D9Y8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ssmem1Q9D9Y8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssmem1Q9D9Y8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.08■□□□□ 0.32
Ssmem1Q9D9Y8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssmem1Q9D9Y8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ssmem1Q9D9Y8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssmem1Q9D9Y8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ssmem1Q9D9Y8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
Ssmem1Q9D9Y8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ssmem1Q9D9Y8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
Ssmem1Q9D9Y8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssmem1Q9D9Y8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ssmem1Q9D9Y8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ssmem1Q9D9Y8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssmem1Q9D9Y8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssmem1Q9D9Y8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssmem1Q9D9Y8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ssmem1Q9D9Y8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ssmem1Q9D9Y8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ssmem1Q9D9Y8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ssmem1Q9D9Y8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssmem1Q9D9Y8 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.05■□□□□ 0.32
Ssmem1Q9D9Y8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms