Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rpap3Q9D706 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rpap3Q9D706 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Rpap3Q9D706 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rpap3Q9D706 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Rpap3Q9D706 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Rpap3Q9D706 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rpap3Q9D706 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Rpap3Q9D706 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.95■■□□□ 1.1
Rpap3Q9D706 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rpap3Q9D706 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rpap3Q9D706 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rpap3Q9D706 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Rpap3Q9D706 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Rpap3Q9D706 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rpap3Q9D706 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.95■■□□□ 1.1
Rpap3Q9D706 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Rpap3Q9D706 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rpap3Q9D706 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rpap3Q9D706 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rpap3Q9D706 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rpap3Q9D706 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
Rpap3Q9D706 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Rpap3Q9D706 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Rpap3Q9D706 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.93■■□□□ 1.1
Rpap3Q9D706 Gm42642-201ENSMUST00000200683 355 ntBASIC21.93■■□□□ 1.1
Rpap3Q9D706 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.93■■□□□ 1.1
Rpap3Q9D706 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rpap3Q9D706 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rpap3Q9D706 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rpap3Q9D706 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Rpap3Q9D706 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.92■■□□□ 1.1
Rpap3Q9D706 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rpap3Q9D706 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpap3Q9D706 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.91■■□□□ 1.1
Rpap3Q9D706 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpap3Q9D706 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpap3Q9D706 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpap3Q9D706 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rpap3Q9D706 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpap3Q9D706 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpap3Q9D706 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rpap3Q9D706 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rpap3Q9D706 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpap3Q9D706 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpap3Q9D706 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.91■■□□□ 1.1
Rpap3Q9D706 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rpap3Q9D706 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rpap3Q9D706 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rpap3Q9D706 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.9■■□□□ 1.1
Rpap3Q9D706 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rpap3Q9D706 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rpap3Q9D706 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.9■■□□□ 1.1
Rpap3Q9D706 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Rpap3Q9D706 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Rpap3Q9D706 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Rpap3Q9D706 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rpap3Q9D706 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rpap3Q9D706 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rpap3Q9D706 Gm27801-201ENSMUST00000184174 223 ntBASIC21.89■■□□□ 1.09
Rpap3Q9D706 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rpap3Q9D706 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rpap3Q9D706 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rpap3Q9D706 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rpap3Q9D706 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rpap3Q9D706 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rpap3Q9D706 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rpap3Q9D706 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Rpap3Q9D706 Gm26571-201ENSMUST00000181399 666 ntBASIC21.88■■□□□ 1.09
Rpap3Q9D706 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rpap3Q9D706 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rpap3Q9D706 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rpap3Q9D706 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rpap3Q9D706 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.87■■□□□ 1.09
Rpap3Q9D706 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.87■■□□□ 1.09
Rpap3Q9D706 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rpap3Q9D706 Gm10849-201ENSMUST00000100397 618 ntBASIC21.87■■□□□ 1.09
Rpap3Q9D706 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rpap3Q9D706 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.87■■□□□ 1.09
Rpap3Q9D706 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rpap3Q9D706 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.87■■□□□ 1.09
Rpap3Q9D706 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rpap3Q9D706 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rpap3Q9D706 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.86■■□□□ 1.09
Rpap3Q9D706 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rpap3Q9D706 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rpap3Q9D706 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.86■■□□□ 1.09
Rpap3Q9D706 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rpap3Q9D706 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.86■■□□□ 1.09
Rpap3Q9D706 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Rpap3Q9D706 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.86■■□□□ 1.09
Rpap3Q9D706 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rpap3Q9D706 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.85■■□□□ 1.09
Rpap3Q9D706 Gm42569-201ENSMUST00000200539 472 ntBASIC21.85■■□□□ 1.09
Rpap3Q9D706 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rpap3Q9D706 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rpap3Q9D706 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Rpap3Q9D706 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rpap3Q9D706 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rpap3Q9D706 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms