Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.1■□□□□ 0.81
Ndc80Q9D0F1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ndc80Q9D0F1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.1■□□□□ 0.81
Ndc80Q9D0F1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ndc80Q9D0F1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ndc80Q9D0F1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ndc80Q9D0F1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ndc80Q9D0F1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.1■□□□□ 0.81
Ndc80Q9D0F1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ndc80Q9D0F1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ndc80Q9D0F1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndc80Q9D0F1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndc80Q9D0F1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndc80Q9D0F1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.09■□□□□ 0.81
Ndc80Q9D0F1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.09■□□□□ 0.81
Ndc80Q9D0F1 Golgb1-201ENSMUST00000023534 498 ntBASIC20.09■□□□□ 0.81
Ndc80Q9D0F1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ndc80Q9D0F1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndc80Q9D0F1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Ndc80Q9D0F1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndc80Q9D0F1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndc80Q9D0F1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndc80Q9D0F1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndc80Q9D0F1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Ndc80Q9D0F1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ndc80Q9D0F1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ndc80Q9D0F1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ndc80Q9D0F1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.08■□□□□ 0.81
Ndc80Q9D0F1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ndc80Q9D0F1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ndc80Q9D0F1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.08■□□□□ 0.8
Ndc80Q9D0F1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ndc80Q9D0F1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ndc80Q9D0F1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ndc80Q9D0F1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ndc80Q9D0F1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.07■□□□□ 0.8
Ndc80Q9D0F1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ndc80Q9D0F1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.07■□□□□ 0.8
Ndc80Q9D0F1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ndc80Q9D0F1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ndc80Q9D0F1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ndc80Q9D0F1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ndc80Q9D0F1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ndc80Q9D0F1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ndc80Q9D0F1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Ndc80Q9D0F1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.06■□□□□ 0.8
Ndc80Q9D0F1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ndc80Q9D0F1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ndc80Q9D0F1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ndc80Q9D0F1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ndc80Q9D0F1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ndc80Q9D0F1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ndc80Q9D0F1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc80Q9D0F1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc80Q9D0F1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc80Q9D0F1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc80Q9D0F1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc80Q9D0F1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc80Q9D0F1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc80Q9D0F1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc80Q9D0F1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc80Q9D0F1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc80Q9D0F1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc80Q9D0F1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc80Q9D0F1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ndc80Q9D0F1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ndc80Q9D0F1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ndc80Q9D0F1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.04■□□□□ 0.8
Ndc80Q9D0F1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ndc80Q9D0F1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ndc80Q9D0F1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ndc80Q9D0F1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ndc80Q9D0F1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ndc80Q9D0F1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ndc80Q9D0F1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ndc80Q9D0F1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ndc80Q9D0F1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ndc80Q9D0F1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ndc80Q9D0F1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.03■□□□□ 0.8
Ndc80Q9D0F1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.02■□□□□ 0.8
Ndc80Q9D0F1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ndc80Q9D0F1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ndc80Q9D0F1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ndc80Q9D0F1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ndc80Q9D0F1 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.02■□□□□ 0.8
Ndc80Q9D0F1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ndc80Q9D0F1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ndc80Q9D0F1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ndc80Q9D0F1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ndc80Q9D0F1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Ndc80Q9D0F1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ndc80Q9D0F1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ndc80Q9D0F1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ndc80Q9D0F1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ndc80Q9D0F1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ndc80Q9D0F1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Ndc80Q9D0F1 Gm9847-201ENSMUST00000052528 599 ntBASIC20.01■□□□□ 0.79
Ndc80Q9D0F1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ndc80Q9D0F1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ndc80Q9D0F1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms