Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrrc40Q9CRC8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrrc40Q9CRC8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrrc40Q9CRC8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.7■□□□□ 0.74
Lrrc40Q9CRC8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.7■□□□□ 0.74
Lrrc40Q9CRC8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrrc40Q9CRC8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Lrrc40Q9CRC8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrrc40Q9CRC8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrrc40Q9CRC8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lrrc40Q9CRC8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrrc40Q9CRC8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lrrc40Q9CRC8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lrrc40Q9CRC8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lrrc40Q9CRC8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lrrc40Q9CRC8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.69■□□□□ 0.74
Lrrc40Q9CRC8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrrc40Q9CRC8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrrc40Q9CRC8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Lrrc40Q9CRC8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.69■□□□□ 0.74
Lrrc40Q9CRC8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.68■□□□□ 0.74
Lrrc40Q9CRC8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lrrc40Q9CRC8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lrrc40Q9CRC8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrrc40Q9CRC8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lrrc40Q9CRC8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrrc40Q9CRC8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lrrc40Q9CRC8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrrc40Q9CRC8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrrc40Q9CRC8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Lrrc40Q9CRC8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Lrrc40Q9CRC8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lrrc40Q9CRC8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.67■□□□□ 0.74
Lrrc40Q9CRC8 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.67■□□□□ 0.74
Lrrc40Q9CRC8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.67■□□□□ 0.74
Lrrc40Q9CRC8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.67■□□□□ 0.74
Lrrc40Q9CRC8 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.67■□□□□ 0.74
Lrrc40Q9CRC8 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.67■□□□□ 0.74
Lrrc40Q9CRC8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.67■□□□□ 0.74
Lrrc40Q9CRC8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lrrc40Q9CRC8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lrrc40Q9CRC8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lrrc40Q9CRC8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Lrrc40Q9CRC8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lrrc40Q9CRC8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrrc40Q9CRC8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrrc40Q9CRC8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.66■□□□□ 0.74
Lrrc40Q9CRC8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lrrc40Q9CRC8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrrc40Q9CRC8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrrc40Q9CRC8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lrrc40Q9CRC8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Lrrc40Q9CRC8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lrrc40Q9CRC8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lrrc40Q9CRC8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lrrc40Q9CRC8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lrrc40Q9CRC8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lrrc40Q9CRC8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lrrc40Q9CRC8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Lrrc40Q9CRC8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lrrc40Q9CRC8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lrrc40Q9CRC8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lrrc40Q9CRC8 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.63■□□□□ 0.73
Lrrc40Q9CRC8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lrrc40Q9CRC8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.63■□□□□ 0.73
Lrrc40Q9CRC8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.63■□□□□ 0.73
Lrrc40Q9CRC8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lrrc40Q9CRC8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lrrc40Q9CRC8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lrrc40Q9CRC8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lrrc40Q9CRC8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Lrrc40Q9CRC8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lrrc40Q9CRC8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrrc40Q9CRC8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrrc40Q9CRC8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrrc40Q9CRC8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lrrc40Q9CRC8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrrc40Q9CRC8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lrrc40Q9CRC8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrrc40Q9CRC8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrrc40Q9CRC8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lrrc40Q9CRC8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lrrc40Q9CRC8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lrrc40Q9CRC8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lrrc40Q9CRC8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Lrrc40Q9CRC8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrrc40Q9CRC8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.61■□□□□ 0.73
Lrrc40Q9CRC8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Lrrc40Q9CRC8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Lrrc40Q9CRC8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrrc40Q9CRC8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lrrc40Q9CRC8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Lrrc40Q9CRC8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.61■□□□□ 0.73
Lrrc40Q9CRC8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.61■□□□□ 0.73
Lrrc40Q9CRC8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lrrc40Q9CRC8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrrc40Q9CRC8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrrc40Q9CRC8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.6■□□□□ 0.73
Lrrc40Q9CRC8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrrc40Q9CRC8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms