Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm7Q9CQQ8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm7Q9CQQ8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm7Q9CQQ8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.05■□□□□ 0.8
Lsm7Q9CQQ8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm7Q9CQQ8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Lsm7Q9CQQ8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Lsm7Q9CQQ8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Lsm7Q9CQQ8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm7Q9CQQ8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm7Q9CQQ8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.04■□□□□ 0.8
Lsm7Q9CQQ8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm7Q9CQQ8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm7Q9CQQ8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm7Q9CQQ8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm7Q9CQQ8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm7Q9CQQ8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm7Q9CQQ8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Lsm7Q9CQQ8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm7Q9CQQ8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm7Q9CQQ8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm7Q9CQQ8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.03■□□□□ 0.8
Lsm7Q9CQQ8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm7Q9CQQ8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm7Q9CQQ8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm7Q9CQQ8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm7Q9CQQ8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
Lsm7Q9CQQ8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm7Q9CQQ8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm7Q9CQQ8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm7Q9CQQ8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm7Q9CQQ8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Lsm7Q9CQQ8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm7Q9CQQ8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Lsm7Q9CQQ8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lsm7Q9CQQ8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Lsm7Q9CQQ8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm7Q9CQQ8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm7Q9CQQ8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm7Q9CQQ8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm7Q9CQQ8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm7Q9CQQ8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.01■□□□□ 0.79
Lsm7Q9CQQ8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.01■□□□□ 0.79
Lsm7Q9CQQ8 Gm5874-201ENSMUST00000096101 508 ntBASIC20.01■□□□□ 0.79
Lsm7Q9CQQ8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Lsm7Q9CQQ8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm7Q9CQQ8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Lsm7Q9CQQ8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Lsm7Q9CQQ8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm7Q9CQQ8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20■□□□□ 0.79
Lsm7Q9CQQ8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Lsm7Q9CQQ8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20■□□□□ 0.79
Lsm7Q9CQQ8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm7Q9CQQ8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm7Q9CQQ8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm7Q9CQQ8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Lsm7Q9CQQ8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Lsm7Q9CQQ8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm7Q9CQQ8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm7Q9CQQ8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Lsm7Q9CQQ8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm7Q9CQQ8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Lsm7Q9CQQ8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm7Q9CQQ8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm7Q9CQQ8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm7Q9CQQ8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm7Q9CQQ8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm7Q9CQQ8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Lsm7Q9CQQ8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm7Q9CQQ8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm7Q9CQQ8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm7Q9CQQ8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm7Q9CQQ8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Lsm7Q9CQQ8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm7Q9CQQ8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Lsm7Q9CQQ8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.97■□□□□ 0.79
Lsm7Q9CQQ8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm7Q9CQQ8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.97■□□□□ 0.79
Lsm7Q9CQQ8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Lsm7Q9CQQ8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Lsm7Q9CQQ8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm7Q9CQQ8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm7Q9CQQ8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Lsm7Q9CQQ8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms