Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh23Q99PF4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.63■□□□□ 0.89
Cdh23Q99PF4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh23Q99PF4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh23Q99PF4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh23Q99PF4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.62■□□□□ 0.89
Cdh23Q99PF4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cdh23Q99PF4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh23Q99PF4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh23Q99PF4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh23Q99PF4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Cdh23Q99PF4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.61■□□□□ 0.89
Cdh23Q99PF4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh23Q99PF4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh23Q99PF4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.61■□□□□ 0.89
Cdh23Q99PF4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh23Q99PF4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh23Q99PF4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.61■□□□□ 0.89
Cdh23Q99PF4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.61■□□□□ 0.89
Cdh23Q99PF4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh23Q99PF4 Trmt13-210ENSMUST00000198454 880 ntBASIC20.6■□□□□ 0.89
Cdh23Q99PF4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh23Q99PF4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh23Q99PF4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh23Q99PF4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh23Q99PF4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh23Q99PF4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.6■□□□□ 0.89
Cdh23Q99PF4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.6■□□□□ 0.89
Cdh23Q99PF4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh23Q99PF4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.6■□□□□ 0.89
Cdh23Q99PF4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.6■□□□□ 0.89
Cdh23Q99PF4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.6■□□□□ 0.89
Cdh23Q99PF4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh23Q99PF4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh23Q99PF4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh23Q99PF4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh23Q99PF4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh23Q99PF4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh23Q99PF4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Cdh23Q99PF4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh23Q99PF4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.58■□□□□ 0.89
Cdh23Q99PF4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh23Q99PF4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh23Q99PF4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh23Q99PF4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh23Q99PF4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
Cdh23Q99PF4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Cdh23Q99PF4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh23Q99PF4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh23Q99PF4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh23Q99PF4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh23Q99PF4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh23Q99PF4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh23Q99PF4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh23Q99PF4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.57■□□□□ 0.88
Cdh23Q99PF4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh23Q99PF4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh23Q99PF4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cdh23Q99PF4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh23Q99PF4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh23Q99PF4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh23Q99PF4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Cdh23Q99PF4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh23Q99PF4 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.56■□□□□ 0.88
Cdh23Q99PF4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Cdh23Q99PF4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.56■□□□□ 0.88
Cdh23Q99PF4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh23Q99PF4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.55■□□□□ 0.88
Cdh23Q99PF4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh23Q99PF4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh23Q99PF4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.55■□□□□ 0.88
Cdh23Q99PF4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh23Q99PF4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh23Q99PF4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.55■□□□□ 0.88
Cdh23Q99PF4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Cdh23Q99PF4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.54■□□□□ 0.88
Cdh23Q99PF4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh23Q99PF4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh23Q99PF4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.53■□□□□ 0.88
Cdh23Q99PF4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh23Q99PF4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh23Q99PF4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.53■□□□□ 0.88
Cdh23Q99PF4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh23Q99PF4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh23Q99PF4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh23Q99PF4 Gm715-201ENSMUST00000117865 831 ntBASIC20.52■□□□□ 0.88
Cdh23Q99PF4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh23Q99PF4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.52■□□□□ 0.88
Cdh23Q99PF4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh23Q99PF4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.51■□□□□ 0.87
Cdh23Q99PF4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh23Q99PF4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh23Q99PF4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cdh23Q99PF4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh23Q99PF4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cdh23Q99PF4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh23Q99PF4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.51■□□□□ 0.87
Cdh23Q99PF4 Gm15565-201ENSMUST00000118890 427 ntBASIC20.51■□□□□ 0.87
Cdh23Q99PF4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh23Q99PF4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms