Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col25a1Q99MQ5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col25a1Q99MQ5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col25a1Q99MQ5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col25a1Q99MQ5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.66■□□□□ 0.9
Col25a1Q99MQ5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.66■□□□□ 0.9
Col25a1Q99MQ5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Col25a1Q99MQ5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Col25a1Q99MQ5 Gm27741-201ENSMUST00000185060 237 ntBASIC20.66■□□□□ 0.9
Col25a1Q99MQ5 Trmt13-210ENSMUST00000198454 880 ntBASIC20.66■□□□□ 0.9
Col25a1Q99MQ5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col25a1Q99MQ5 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col25a1Q99MQ5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col25a1Q99MQ5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col25a1Q99MQ5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col25a1Q99MQ5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col25a1Q99MQ5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col25a1Q99MQ5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.65■□□□□ 0.9
Col25a1Q99MQ5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col25a1Q99MQ5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col25a1Q99MQ5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col25a1Q99MQ5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col25a1Q99MQ5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col25a1Q99MQ5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.65■□□□□ 0.9
Col25a1Q99MQ5 Gm13148-201ENSMUST00000118892 745 ntBASIC20.65■□□□□ 0.9
Col25a1Q99MQ5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col25a1Q99MQ5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Col25a1Q99MQ5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.65■□□□□ 0.9
Col25a1Q99MQ5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Col25a1Q99MQ5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col25a1Q99MQ5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col25a1Q99MQ5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.64■□□□□ 0.89
Col25a1Q99MQ5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col25a1Q99MQ5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col25a1Q99MQ5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col25a1Q99MQ5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.64■□□□□ 0.89
Col25a1Q99MQ5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col25a1Q99MQ5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col25a1Q99MQ5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col25a1Q99MQ5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col25a1Q99MQ5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.63■□□□□ 0.89
Col25a1Q99MQ5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col25a1Q99MQ5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col25a1Q99MQ5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col25a1Q99MQ5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.63■□□□□ 0.89
Col25a1Q99MQ5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.63■□□□□ 0.89
Col25a1Q99MQ5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col25a1Q99MQ5 Gm6576-201ENSMUST00000169678 883 ntBASIC20.63■□□□□ 0.89
Col25a1Q99MQ5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col25a1Q99MQ5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col25a1Q99MQ5 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col25a1Q99MQ5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col25a1Q99MQ5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col25a1Q99MQ5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.62■□□□□ 0.89
Col25a1Q99MQ5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.62■□□□□ 0.89
Col25a1Q99MQ5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col25a1Q99MQ5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col25a1Q99MQ5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col25a1Q99MQ5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col25a1Q99MQ5 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.61■□□□□ 0.89
Col25a1Q99MQ5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.61■□□□□ 0.89
Col25a1Q99MQ5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Col25a1Q99MQ5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col25a1Q99MQ5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.6■□□□□ 0.89
Col25a1Q99MQ5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col25a1Q99MQ5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col25a1Q99MQ5 Gm15565-201ENSMUST00000118890 427 ntBASIC20.6■□□□□ 0.89
Col25a1Q99MQ5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col25a1Q99MQ5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col25a1Q99MQ5 Gm21362-201ENSMUST00000194272 928 ntBASIC20.6■□□□□ 0.89
Col25a1Q99MQ5 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.6■□□□□ 0.89
Col25a1Q99MQ5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.59■□□□□ 0.89
Col25a1Q99MQ5 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col25a1Q99MQ5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col25a1Q99MQ5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.59■□□□□ 0.89
Col25a1Q99MQ5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col25a1Q99MQ5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col25a1Q99MQ5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col25a1Q99MQ5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col25a1Q99MQ5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col25a1Q99MQ5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col25a1Q99MQ5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col25a1Q99MQ5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col25a1Q99MQ5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
Col25a1Q99MQ5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col25a1Q99MQ5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col25a1Q99MQ5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col25a1Q99MQ5 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.58■□□□□ 0.89
Col25a1Q99MQ5 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.58■□□□□ 0.89
Col25a1Q99MQ5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Col25a1Q99MQ5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col25a1Q99MQ5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col25a1Q99MQ5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col25a1Q99MQ5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Col25a1Q99MQ5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.57■□□□□ 0.88
Col25a1Q99MQ5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Col25a1Q99MQ5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col25a1Q99MQ5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col25a1Q99MQ5 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.57■□□□□ 0.88
Col25a1Q99MQ5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms