Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tlr3Q99MB1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Tlr3Q99MB1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tlr3Q99MB1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.3■■□□□ 1
Tlr3Q99MB1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.3■■□□□ 1
Tlr3Q99MB1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Tlr3Q99MB1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tlr3Q99MB1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tlr3Q99MB1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.29■■□□□ 1
Tlr3Q99MB1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tlr3Q99MB1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.29■■□□□ 1
Tlr3Q99MB1 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.29■■□□□ 1
Tlr3Q99MB1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tlr3Q99MB1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tlr3Q99MB1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Tlr3Q99MB1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tlr3Q99MB1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tlr3Q99MB1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tlr3Q99MB1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tlr3Q99MB1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tlr3Q99MB1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Tlr3Q99MB1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Tlr3Q99MB1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tlr3Q99MB1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.27■■□□□ 1
Tlr3Q99MB1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.27■■□□□ 1
Tlr3Q99MB1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Tlr3Q99MB1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tlr3Q99MB1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tlr3Q99MB1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.27■■□□□ 1
Tlr3Q99MB1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tlr3Q99MB1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.27■□□□□ 0.99
Tlr3Q99MB1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Tlr3Q99MB1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tlr3Q99MB1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tlr3Q99MB1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tlr3Q99MB1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tlr3Q99MB1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.26■□□□□ 0.99
Tlr3Q99MB1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tlr3Q99MB1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Tlr3Q99MB1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Tlr3Q99MB1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tlr3Q99MB1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tlr3Q99MB1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tlr3Q99MB1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Tlr3Q99MB1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tlr3Q99MB1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tlr3Q99MB1 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.24■□□□□ 0.99
Tlr3Q99MB1 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.24■□□□□ 0.99
Tlr3Q99MB1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tlr3Q99MB1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tlr3Q99MB1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Tlr3Q99MB1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tlr3Q99MB1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tlr3Q99MB1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tlr3Q99MB1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tlr3Q99MB1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.24■□□□□ 0.99
Tlr3Q99MB1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tlr3Q99MB1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tlr3Q99MB1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tlr3Q99MB1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tlr3Q99MB1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tlr3Q99MB1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tlr3Q99MB1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.23■□□□□ 0.99
Tlr3Q99MB1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tlr3Q99MB1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tlr3Q99MB1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tlr3Q99MB1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tlr3Q99MB1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tlr3Q99MB1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.22■□□□□ 0.99
Tlr3Q99MB1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tlr3Q99MB1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tlr3Q99MB1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.22■□□□□ 0.99
Tlr3Q99MB1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tlr3Q99MB1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tlr3Q99MB1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.22■□□□□ 0.99
Tlr3Q99MB1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.22■□□□□ 0.99
Tlr3Q99MB1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
Tlr3Q99MB1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tlr3Q99MB1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tlr3Q99MB1 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.21■□□□□ 0.99
Tlr3Q99MB1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tlr3Q99MB1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Tlr3Q99MB1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.21■□□□□ 0.99
Tlr3Q99MB1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tlr3Q99MB1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tlr3Q99MB1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Tlr3Q99MB1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tlr3Q99MB1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tlr3Q99MB1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Tlr3Q99MB1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Tlr3Q99MB1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tlr3Q99MB1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Tlr3Q99MB1 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.2■□□□□ 0.98
Tlr3Q99MB1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tlr3Q99MB1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Tlr3Q99MB1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.2■□□□□ 0.98
Tlr3Q99MB1 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.2■□□□□ 0.98
Tlr3Q99MB1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Tlr3Q99MB1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tlr3Q99MB1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms