Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Nkx6-1Q99MA9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx6-1Q99MA9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx6-1Q99MA9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Nkx6-1Q99MA9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx6-1Q99MA9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx6-1Q99MA9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx6-1Q99MA9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx6-1Q99MA9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx6-1Q99MA9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Nkx6-1Q99MA9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx6-1Q99MA9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx6-1Q99MA9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx6-1Q99MA9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.63■□□□□ 0.57
Nkx6-1Q99MA9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx6-1Q99MA9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Nkx6-1Q99MA9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nkx6-1Q99MA9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx6-1Q99MA9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nkx6-1Q99MA9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx6-1Q99MA9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx6-1Q99MA9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Nkx6-1Q99MA9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.62■□□□□ 0.57
Nkx6-1Q99MA9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx6-1Q99MA9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx6-1Q99MA9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx6-1Q99MA9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx6-1Q99MA9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.62■□□□□ 0.57
Nkx6-1Q99MA9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx6-1Q99MA9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nkx6-1Q99MA9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx6-1Q99MA9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx6-1Q99MA9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx6-1Q99MA9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx6-1Q99MA9 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.61■□□□□ 0.57
Nkx6-1Q99MA9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx6-1Q99MA9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Nkx6-1Q99MA9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx6-1Q99MA9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx6-1Q99MA9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx6-1Q99MA9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx6-1Q99MA9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx6-1Q99MA9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.6■□□□□ 0.57
Nkx6-1Q99MA9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nkx6-1Q99MA9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.6■□□□□ 0.57
Nkx6-1Q99MA9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx6-1Q99MA9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Nkx6-1Q99MA9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx6-1Q99MA9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.6■□□□□ 0.57
Nkx6-1Q99MA9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.6■□□□□ 0.57
Nkx6-1Q99MA9 Gm8520-201ENSMUST00000186517 868 ntBASIC18.6■□□□□ 0.57
Nkx6-1Q99MA9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nkx6-1Q99MA9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx6-1Q99MA9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nkx6-1Q99MA9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nkx6-1Q99MA9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.59■□□□□ 0.57
Nkx6-1Q99MA9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.59■□□□□ 0.57
Nkx6-1Q99MA9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx6-1Q99MA9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx6-1Q99MA9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx6-1Q99MA9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx6-1Q99MA9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx6-1Q99MA9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx6-1Q99MA9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx6-1Q99MA9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx6-1Q99MA9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Nkx6-1Q99MA9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
Nkx6-1Q99MA9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx6-1Q99MA9 Gm12527-201ENSMUST00000117967 564 ntBASIC18.58■□□□□ 0.56
Nkx6-1Q99MA9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Nkx6-1Q99MA9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx6-1Q99MA9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.58■□□□□ 0.56
Nkx6-1Q99MA9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx6-1Q99MA9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx6-1Q99MA9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx6-1Q99MA9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx6-1Q99MA9 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.57■□□□□ 0.56
Nkx6-1Q99MA9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx6-1Q99MA9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.57■□□□□ 0.56
Nkx6-1Q99MA9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx6-1Q99MA9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx6-1Q99MA9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx6-1Q99MA9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx6-1Q99MA9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nkx6-1Q99MA9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx6-1Q99MA9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx6-1Q99MA9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx6-1Q99MA9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx6-1Q99MA9 Mir7071-201ENSMUST00000184847 69 ntBASIC18.56■□□□□ 0.56
Nkx6-1Q99MA9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx6-1Q99MA9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx6-1Q99MA9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Nkx6-1Q99MA9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx6-1Q99MA9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx6-1Q99MA9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Nkx6-1Q99MA9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
Nkx6-1Q99MA9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx6-1Q99MA9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx6-1Q99MA9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx6-1Q99MA9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms