Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha8Q91Y12 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha8Q91Y12 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha8Q91Y12 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha8Q91Y12 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha8Q91Y12 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.25■□□□□ 0.67
Pcdha8Q91Y12 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha8Q91Y12 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha8Q91Y12 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha8Q91Y12 Gm12922-201ENSMUST00000120626 809 ntBASIC19.25■□□□□ 0.67
Pcdha8Q91Y12 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha8Q91Y12 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Pcdha8Q91Y12 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha8Q91Y12 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha8Q91Y12 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha8Q91Y12 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha8Q91Y12 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pcdha8Q91Y12 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha8Q91Y12 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha8Q91Y12 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha8Q91Y12 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha8Q91Y12 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha8Q91Y12 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha8Q91Y12 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.24■□□□□ 0.67
Pcdha8Q91Y12 Mir6236-201ENSMUST00000184437 123 ntBASIC19.24■□□□□ 0.67
Pcdha8Q91Y12 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pcdha8Q91Y12 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha8Q91Y12 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdha8Q91Y12 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha8Q91Y12 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha8Q91Y12 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha8Q91Y12 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha8Q91Y12 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha8Q91Y12 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha8Q91Y12 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Pcdha8Q91Y12 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pcdha8Q91Y12 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha8Q91Y12 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdha8Q91Y12 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha8Q91Y12 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha8Q91Y12 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha8Q91Y12 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha8Q91Y12 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pcdha8Q91Y12 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha8Q91Y12 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha8Q91Y12 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha8Q91Y12 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Pcdha8Q91Y12 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha8Q91Y12 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcdha8Q91Y12 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdha8Q91Y12 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha8Q91Y12 Golgb1-201ENSMUST00000023534 498 ntBASIC19.22■□□□□ 0.67
Pcdha8Q91Y12 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha8Q91Y12 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha8Q91Y12 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha8Q91Y12 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdha8Q91Y12 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdha8Q91Y12 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.22■□□□□ 0.67
Pcdha8Q91Y12 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha8Q91Y12 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.21■□□□□ 0.67
Pcdha8Q91Y12 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pcdha8Q91Y12 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdha8Q91Y12 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdha8Q91Y12 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha8Q91Y12 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdha8Q91Y12 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha8Q91Y12 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha8Q91Y12 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha8Q91Y12 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdha8Q91Y12 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdha8Q91Y12 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdha8Q91Y12 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha8Q91Y12 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.2■□□□□ 0.66
Pcdha8Q91Y12 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha8Q91Y12 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdha8Q91Y12 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdha8Q91Y12 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdha8Q91Y12 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha8Q91Y12 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha8Q91Y12 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha8Q91Y12 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha8Q91Y12 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Pcdha8Q91Y12 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.19■□□□□ 0.66
Pcdha8Q91Y12 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.19■□□□□ 0.66
Pcdha8Q91Y12 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha8Q91Y12 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pcdha8Q91Y12 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha8Q91Y12 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcdha8Q91Y12 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.18■□□□□ 0.66
Pcdha8Q91Y12 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha8Q91Y12 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha8Q91Y12 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha8Q91Y12 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha8Q91Y12 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha8Q91Y12 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha8Q91Y12 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pcdha8Q91Y12 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha8Q91Y12 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha8Q91Y12 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha8Q91Y12 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms