Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhac2Q91Y09 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdhac2Q91Y09 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.71■■□□□ 1.07
Pcdhac2Q91Y09 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.71■■□□□ 1.07
Pcdhac2Q91Y09 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhac2Q91Y09 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhac2Q91Y09 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhac2Q91Y09 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhac2Q91Y09 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhac2Q91Y09 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Pcdhac2Q91Y09 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Pcdhac2Q91Y09 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Pcdhac2Q91Y09 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.7■■□□□ 1.06
Pcdhac2Q91Y09 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhac2Q91Y09 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhac2Q91Y09 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Pcdhac2Q91Y09 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhac2Q91Y09 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.69■■□□□ 1.06
Pcdhac2Q91Y09 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.69■■□□□ 1.06
Pcdhac2Q91Y09 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhac2Q91Y09 Gm10602-201ENSMUST00000098239 609 ntBASIC21.69■■□□□ 1.06
Pcdhac2Q91Y09 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhac2Q91Y09 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhac2Q91Y09 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhac2Q91Y09 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhac2Q91Y09 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhac2Q91Y09 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhac2Q91Y09 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
Pcdhac2Q91Y09 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Pcdhac2Q91Y09 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhac2Q91Y09 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhac2Q91Y09 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pcdhac2Q91Y09 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhac2Q91Y09 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhac2Q91Y09 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhac2Q91Y09 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhac2Q91Y09 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhac2Q91Y09 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhac2Q91Y09 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhac2Q91Y09 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Pcdhac2Q91Y09 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhac2Q91Y09 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.66■■□□□ 1.06
Pcdhac2Q91Y09 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.66■■□□□ 1.06
Pcdhac2Q91Y09 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.66■■□□□ 1.06
Pcdhac2Q91Y09 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhac2Q91Y09 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhac2Q91Y09 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhac2Q91Y09 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.65■■□□□ 1.06
Pcdhac2Q91Y09 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Pcdhac2Q91Y09 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.65■■□□□ 1.06
Pcdhac2Q91Y09 Gm27801-201ENSMUST00000184174 223 ntBASIC21.65■■□□□ 1.06
Pcdhac2Q91Y09 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhac2Q91Y09 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhac2Q91Y09 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhac2Q91Y09 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhac2Q91Y09 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhac2Q91Y09 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.64■■□□□ 1.05
Pcdhac2Q91Y09 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.64■■□□□ 1.05
Pcdhac2Q91Y09 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhac2Q91Y09 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdhac2Q91Y09 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhac2Q91Y09 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhac2Q91Y09 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhac2Q91Y09 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhac2Q91Y09 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Pcdhac2Q91Y09 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhac2Q91Y09 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhac2Q91Y09 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhac2Q91Y09 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Pcdhac2Q91Y09 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhac2Q91Y09 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.62■■□□□ 1.05
Pcdhac2Q91Y09 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhac2Q91Y09 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhac2Q91Y09 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhac2Q91Y09 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhac2Q91Y09 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdhac2Q91Y09 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdhac2Q91Y09 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhac2Q91Y09 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.6■■□□□ 1.05
Pcdhac2Q91Y09 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhac2Q91Y09 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhac2Q91Y09 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhac2Q91Y09 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.6■■□□□ 1.05
Pcdhac2Q91Y09 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhac2Q91Y09 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhac2Q91Y09 Gm7514-201ENSMUST00000209475 934 ntBASIC21.6■■□□□ 1.05
Pcdhac2Q91Y09 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhac2Q91Y09 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhac2Q91Y09 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Pcdhac2Q91Y09 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhac2Q91Y09 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhac2Q91Y09 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhac2Q91Y09 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhac2Q91Y09 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Pcdhac2Q91Y09 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.59■■□□□ 1.05
Pcdhac2Q91Y09 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Pcdhac2Q91Y09 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhac2Q91Y09 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhac2Q91Y09 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhac2Q91Y09 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms