Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb1Q91Y08 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb1Q91Y08 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb1Q91Y08 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb1Q91Y08 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb1Q91Y08 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb1Q91Y08 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb1Q91Y08 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb1Q91Y08 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcdhb1Q91Y08 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb1Q91Y08 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb1Q91Y08 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb1Q91Y08 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.63■□□□□ 0.89
Pcdhb1Q91Y08 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb1Q91Y08 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb1Q91Y08 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb1Q91Y08 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.62■□□□□ 0.89
Pcdhb1Q91Y08 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb1Q91Y08 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb1Q91Y08 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb1Q91Y08 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb1Q91Y08 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdhb1Q91Y08 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb1Q91Y08 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb1Q91Y08 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdhb1Q91Y08 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb1Q91Y08 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb1Q91Y08 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb1Q91Y08 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb1Q91Y08 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb1Q91Y08 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb1Q91Y08 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb1Q91Y08 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhb1Q91Y08 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb1Q91Y08 Gm9847-201ENSMUST00000052528 599 ntBASIC20.61■□□□□ 0.89
Pcdhb1Q91Y08 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.61■□□□□ 0.89
Pcdhb1Q91Y08 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb1Q91Y08 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb1Q91Y08 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.61■□□□□ 0.89
Pcdhb1Q91Y08 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Pcdhb1Q91Y08 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb1Q91Y08 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.6■□□□□ 0.89
Pcdhb1Q91Y08 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb1Q91Y08 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb1Q91Y08 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb1Q91Y08 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb1Q91Y08 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb1Q91Y08 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Pcdhb1Q91Y08 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdhb1Q91Y08 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb1Q91Y08 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Pcdhb1Q91Y08 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.59■□□□□ 0.89
Pcdhb1Q91Y08 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.59■□□□□ 0.89
Pcdhb1Q91Y08 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb1Q91Y08 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb1Q91Y08 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.59■□□□□ 0.89
Pcdhb1Q91Y08 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.59■□□□□ 0.89
Pcdhb1Q91Y08 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhb1Q91Y08 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb1Q91Y08 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb1Q91Y08 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb1Q91Y08 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhb1Q91Y08 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb1Q91Y08 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb1Q91Y08 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb1Q91Y08 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
Pcdhb1Q91Y08 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.58■□□□□ 0.89
Pcdhb1Q91Y08 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
Pcdhb1Q91Y08 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb1Q91Y08 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb1Q91Y08 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb1Q91Y08 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb1Q91Y08 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb1Q91Y08 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb1Q91Y08 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb1Q91Y08 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb1Q91Y08 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb1Q91Y08 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb1Q91Y08 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.57■□□□□ 0.88
Pcdhb1Q91Y08 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdhb1Q91Y08 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb1Q91Y08 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.57■□□□□ 0.88
Pcdhb1Q91Y08 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Pcdhb1Q91Y08 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb1Q91Y08 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb1Q91Y08 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb1Q91Y08 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb1Q91Y08 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pcdhb1Q91Y08 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhb1Q91Y08 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.55■□□□□ 0.88
Pcdhb1Q91Y08 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.55■□□□□ 0.88
Pcdhb1Q91Y08 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb1Q91Y08 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb1Q91Y08 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb1Q91Y08 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb1Q91Y08 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb1Q91Y08 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb1Q91Y08 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhb1Q91Y08 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb1Q91Y08 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms