Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Pcdhga11Q91XY8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga11Q91XY8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga11Q91XY8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga11Q91XY8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga11Q91XY8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga11Q91XY8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pcdhga11Q91XY8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga11Q91XY8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga11Q91XY8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga11Q91XY8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga11Q91XY8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Pcdhga11Q91XY8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga11Q91XY8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga11Q91XY8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga11Q91XY8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhga11Q91XY8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhga11Q91XY8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdhga11Q91XY8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhga11Q91XY8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga11Q91XY8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga11Q91XY8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga11Q91XY8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga11Q91XY8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhga11Q91XY8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga11Q91XY8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
Pcdhga11Q91XY8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga11Q91XY8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga11Q91XY8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga11Q91XY8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga11Q91XY8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhga11Q91XY8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhga11Q91XY8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga11Q91XY8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga11Q91XY8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga11Q91XY8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga11Q91XY8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga11Q91XY8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga11Q91XY8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.02■□□□□ 0.64
Pcdhga11Q91XY8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Pcdhga11Q91XY8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.02■□□□□ 0.64
Pcdhga11Q91XY8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga11Q91XY8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhga11Q91XY8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga11Q91XY8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga11Q91XY8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdhga11Q91XY8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga11Q91XY8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga11Q91XY8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdhga11Q91XY8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.01■□□□□ 0.63
Pcdhga11Q91XY8 Gm15039-201ENSMUST00000118914 875 ntBASIC19.01■□□□□ 0.63
Pcdhga11Q91XY8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdhga11Q91XY8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga11Q91XY8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdhga11Q91XY8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga11Q91XY8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga11Q91XY8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga11Q91XY8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19■□□□□ 0.63
Pcdhga11Q91XY8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19■□□□□ 0.63
Pcdhga11Q91XY8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Pcdhga11Q91XY8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Pcdhga11Q91XY8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga11Q91XY8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga11Q91XY8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga11Q91XY8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga11Q91XY8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga11Q91XY8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga11Q91XY8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga11Q91XY8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga11Q91XY8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdhga11Q91XY8 Gm22238-201ENSMUST00000175222 88 ntBASIC18.99■□□□□ 0.63
Pcdhga11Q91XY8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga11Q91XY8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga11Q91XY8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga11Q91XY8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga11Q91XY8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga11Q91XY8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga11Q91XY8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga11Q91XY8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga11Q91XY8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga11Q91XY8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga11Q91XY8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhga11Q91XY8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga11Q91XY8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga11Q91XY8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhga11Q91XY8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga11Q91XY8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga11Q91XY8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga11Q91XY8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga11Q91XY8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga11Q91XY8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga11Q91XY8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga11Q91XY8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga11Q91XY8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga11Q91XY8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga11Q91XY8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga11Q91XY8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga11Q91XY8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Pcdhga11Q91XY8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.97■□□□□ 0.63
Pcdhga11Q91XY8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms