Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Snx9Q91VH2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx9Q91VH2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Snx9Q91VH2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx9Q91VH2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Snx9Q91VH2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx9Q91VH2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Snx9Q91VH2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Snx9Q91VH2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Snx9Q91VH2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Snx9Q91VH2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx9Q91VH2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx9Q91VH2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx9Q91VH2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx9Q91VH2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx9Q91VH2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Snx9Q91VH2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Snx9Q91VH2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx9Q91VH2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Snx9Q91VH2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx9Q91VH2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx9Q91VH2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Snx9Q91VH2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
Snx9Q91VH2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.84■□□□□ 0.93
Snx9Q91VH2 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.84■□□□□ 0.93
Snx9Q91VH2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Snx9Q91VH2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx9Q91VH2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx9Q91VH2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx9Q91VH2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Snx9Q91VH2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Snx9Q91VH2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Snx9Q91VH2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Snx9Q91VH2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Snx9Q91VH2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Snx9Q91VH2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Snx9Q91VH2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Snx9Q91VH2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Snx9Q91VH2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Snx9Q91VH2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Snx9Q91VH2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Snx9Q91VH2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Snx9Q91VH2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Snx9Q91VH2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Snx9Q91VH2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Snx9Q91VH2 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.81■□□□□ 0.92
Snx9Q91VH2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Snx9Q91VH2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Snx9Q91VH2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Snx9Q91VH2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Snx9Q91VH2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Snx9Q91VH2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.8■□□□□ 0.92
Snx9Q91VH2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.8■□□□□ 0.92
Snx9Q91VH2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Snx9Q91VH2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Snx9Q91VH2 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.8■□□□□ 0.92
Snx9Q91VH2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Snx9Q91VH2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Snx9Q91VH2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Snx9Q91VH2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snx9Q91VH2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snx9Q91VH2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
Snx9Q91VH2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snx9Q91VH2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snx9Q91VH2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Snx9Q91VH2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snx9Q91VH2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snx9Q91VH2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snx9Q91VH2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Snx9Q91VH2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snx9Q91VH2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Snx9Q91VH2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Snx9Q91VH2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Snx9Q91VH2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snx9Q91VH2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Snx9Q91VH2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snx9Q91VH2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snx9Q91VH2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Snx9Q91VH2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snx9Q91VH2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Snx9Q91VH2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Snx9Q91VH2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Snx9Q91VH2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snx9Q91VH2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.77■□□□□ 0.92
Snx9Q91VH2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Snx9Q91VH2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Snx9Q91VH2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Snx9Q91VH2 Gm26833-201ENSMUST00000180899 440 ntBASIC20.77■□□□□ 0.92
Snx9Q91VH2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.77■□□□□ 0.92
Snx9Q91VH2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Snx9Q91VH2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Snx9Q91VH2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Snx9Q91VH2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Snx9Q91VH2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Snx9Q91VH2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Snx9Q91VH2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Snx9Q91VH2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Snx9Q91VH2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
Snx9Q91VH2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Snx9Q91VH2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms