Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.66■□□□□ 0.74
Vsx1Q91V10 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vsx1Q91V10 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Vsx1Q91V10 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Vsx1Q91V10 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vsx1Q91V10 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Vsx1Q91V10 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Vsx1Q91V10 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vsx1Q91V10 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Vsx1Q91V10 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Vsx1Q91V10 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Vsx1Q91V10 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.65■□□□□ 0.74
Vsx1Q91V10 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vsx1Q91V10 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vsx1Q91V10 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Vsx1Q91V10 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vsx1Q91V10 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vsx1Q91V10 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Vsx1Q91V10 Gm10252-201ENSMUST00000209541 832 ntBASIC19.64■□□□□ 0.73
Vsx1Q91V10 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.64■□□□□ 0.73
Vsx1Q91V10 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Vsx1Q91V10 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vsx1Q91V10 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vsx1Q91V10 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Vsx1Q91V10 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vsx1Q91V10 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Vsx1Q91V10 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vsx1Q91V10 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.63■□□□□ 0.73
Vsx1Q91V10 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vsx1Q91V10 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vsx1Q91V10 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Vsx1Q91V10 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vsx1Q91V10 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vsx1Q91V10 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Vsx1Q91V10 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Vsx1Q91V10 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vsx1Q91V10 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.62■□□□□ 0.73
Vsx1Q91V10 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.62■□□□□ 0.73
Vsx1Q91V10 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vsx1Q91V10 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.62■□□□□ 0.73
Vsx1Q91V10 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Vsx1Q91V10 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vsx1Q91V10 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx1Q91V10 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx1Q91V10 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx1Q91V10 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.61■□□□□ 0.73
Vsx1Q91V10 Reep4-203ENSMUST00000226563 1444 ntBASIC19.61■□□□□ 0.73
Vsx1Q91V10 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx1Q91V10 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx1Q91V10 Gm13234-201ENSMUST00000120010 747 ntBASIC19.61■□□□□ 0.73
Vsx1Q91V10 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.61■□□□□ 0.73
Vsx1Q91V10 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx1Q91V10 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx1Q91V10 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx1Q91V10 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx1Q91V10 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Vsx1Q91V10 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vsx1Q91V10 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Vsx1Q91V10 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vsx1Q91V10 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vsx1Q91V10 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vsx1Q91V10 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vsx1Q91V10 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vsx1Q91V10 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
Vsx1Q91V10 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vsx1Q91V10 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vsx1Q91V10 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vsx1Q91V10 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vsx1Q91V10 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vsx1Q91V10 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vsx1Q91V10 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.59■□□□□ 0.73
Vsx1Q91V10 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vsx1Q91V10 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
Vsx1Q91V10 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Vsx1Q91V10 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Vsx1Q91V10 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Vsx1Q91V10 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Vsx1Q91V10 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vsx1Q91V10 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.58■□□□□ 0.72
Vsx1Q91V10 Gm22240-201ENSMUST00000175225 82 ntBASIC19.58■□□□□ 0.72
Vsx1Q91V10 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Vsx1Q91V10 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vsx1Q91V10 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.58■□□□□ 0.72
Vsx1Q91V10 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.58■□□□□ 0.72
Vsx1Q91V10 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vsx1Q91V10 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vsx1Q91V10 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vsx1Q91V10 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vsx1Q91V10 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vsx1Q91V10 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Vsx1Q91V10 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Vsx1Q91V10 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vsx1Q91V10 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vsx1Q91V10 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.57■□□□□ 0.72
Vsx1Q91V10 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Vsx1Q91V10 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vsx1Q91V10 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vsx1Q91V10 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vsx1Q91V10 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vsx1Q91V10 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms