Protein–RNA interactions for Protein: Q8VEM1

Rnf130, E3 ubiquitin-protein ligase RNF130, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf130Q8VEM1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf130Q8VEM1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf130Q8VEM1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf130Q8VEM1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf130Q8VEM1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.67■□□□□ 0.58
Rnf130Q8VEM1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf130Q8VEM1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf130Q8VEM1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf130Q8VEM1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf130Q8VEM1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf130Q8VEM1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf130Q8VEM1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf130Q8VEM1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.65■□□□□ 0.58
Rnf130Q8VEM1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf130Q8VEM1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf130Q8VEM1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf130Q8VEM1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf130Q8VEM1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf130Q8VEM1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf130Q8VEM1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Rnf130Q8VEM1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.64■□□□□ 0.57
Rnf130Q8VEM1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf130Q8VEM1 Etf1-202ENSMUST00000180351 108 ntBASIC18.64■□□□□ 0.57
Rnf130Q8VEM1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.64■□□□□ 0.57
Rnf130Q8VEM1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rnf130Q8VEM1 Gm43530-201ENSMUST00000195920 274 ntBASIC18.64■□□□□ 0.57
Rnf130Q8VEM1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf130Q8VEM1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf130Q8VEM1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf130Q8VEM1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rnf130Q8VEM1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
Rnf130Q8VEM1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf130Q8VEM1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.64■□□□□ 0.57
Rnf130Q8VEM1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf130Q8VEM1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf130Q8VEM1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf130Q8VEM1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.63■□□□□ 0.57
Rnf130Q8VEM1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf130Q8VEM1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rnf130Q8VEM1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf130Q8VEM1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf130Q8VEM1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf130Q8VEM1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf130Q8VEM1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf130Q8VEM1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf130Q8VEM1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf130Q8VEM1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf130Q8VEM1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf130Q8VEM1 Mir6236-201ENSMUST00000184437 123 ntBASIC18.62■□□□□ 0.57
Rnf130Q8VEM1 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.62■□□□□ 0.57
Rnf130Q8VEM1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf130Q8VEM1 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.62■□□□□ 0.57
Rnf130Q8VEM1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf130Q8VEM1 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.62■□□□□ 0.57
Rnf130Q8VEM1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf130Q8VEM1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf130Q8VEM1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf130Q8VEM1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf130Q8VEM1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf130Q8VEM1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf130Q8VEM1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf130Q8VEM1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Rnf130Q8VEM1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf130Q8VEM1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf130Q8VEM1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.61■□□□□ 0.57
Rnf130Q8VEM1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf130Q8VEM1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf130Q8VEM1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf130Q8VEM1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf130Q8VEM1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf130Q8VEM1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.6■□□□□ 0.57
Rnf130Q8VEM1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf130Q8VEM1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf130Q8VEM1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.6■□□□□ 0.57
Rnf130Q8VEM1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf130Q8VEM1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf130Q8VEM1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rnf130Q8VEM1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf130Q8VEM1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf130Q8VEM1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf130Q8VEM1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf130Q8VEM1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf130Q8VEM1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.59■□□□□ 0.57
Rnf130Q8VEM1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rnf130Q8VEM1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf130Q8VEM1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rnf130Q8VEM1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf130Q8VEM1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.59■□□□□ 0.57
Rnf130Q8VEM1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf130Q8VEM1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.59■□□□□ 0.57
Rnf130Q8VEM1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rnf130Q8VEM1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf130Q8VEM1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Rnf130Q8VEM1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Rnf130Q8VEM1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf130Q8VEM1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf130Q8VEM1 Gm9959-201ENSMUST00000068277 390 ntBASIC18.58■□□□□ 0.56
Rnf130Q8VEM1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
Rnf130Q8VEM1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf130Q8VEM1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms