Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc6a20aQ8VDB9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slc6a20aQ8VDB9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc6a20aQ8VDB9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.58■□□□□ 0.72
Slc6a20aQ8VDB9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc6a20aQ8VDB9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Slc6a20aQ8VDB9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc6a20aQ8VDB9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Slc6a20aQ8VDB9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc6a20aQ8VDB9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Slc6a20aQ8VDB9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a20aQ8VDB9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a20aQ8VDB9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.57■□□□□ 0.72
Slc6a20aQ8VDB9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.57■□□□□ 0.72
Slc6a20aQ8VDB9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a20aQ8VDB9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
Slc6a20aQ8VDB9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a20aQ8VDB9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a20aQ8VDB9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a20aQ8VDB9 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.56■□□□□ 0.72
Slc6a20aQ8VDB9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a20aQ8VDB9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a20aQ8VDB9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.56■□□□□ 0.72
Slc6a20aQ8VDB9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a20aQ8VDB9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Slc6a20aQ8VDB9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a20aQ8VDB9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a20aQ8VDB9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20aQ8VDB9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20aQ8VDB9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20aQ8VDB9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20aQ8VDB9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Slc6a20aQ8VDB9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20aQ8VDB9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Slc6a20aQ8VDB9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20aQ8VDB9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.55■□□□□ 0.72
Slc6a20aQ8VDB9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20aQ8VDB9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20aQ8VDB9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a20aQ8VDB9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a20aQ8VDB9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a20aQ8VDB9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a20aQ8VDB9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.54■□□□□ 0.72
Slc6a20aQ8VDB9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.54■□□□□ 0.72
Slc6a20aQ8VDB9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.54■□□□□ 0.72
Slc6a20aQ8VDB9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Slc6a20aQ8VDB9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a20aQ8VDB9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a20aQ8VDB9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a20aQ8VDB9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a20aQ8VDB9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Slc6a20aQ8VDB9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.53■□□□□ 0.72
Slc6a20aQ8VDB9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Slc6a20aQ8VDB9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a20aQ8VDB9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Slc6a20aQ8VDB9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.53■□□□□ 0.72
Slc6a20aQ8VDB9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a20aQ8VDB9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a20aQ8VDB9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a20aQ8VDB9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a20aQ8VDB9 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.52■□□□□ 0.72
Slc6a20aQ8VDB9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a20aQ8VDB9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a20aQ8VDB9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a20aQ8VDB9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a20aQ8VDB9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a20aQ8VDB9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.52■□□□□ 0.72
Slc6a20aQ8VDB9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Slc6a20aQ8VDB9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Slc6a20aQ8VDB9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a20aQ8VDB9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
Slc6a20aQ8VDB9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Slc6a20aQ8VDB9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20aQ8VDB9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20aQ8VDB9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20aQ8VDB9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20aQ8VDB9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20aQ8VDB9 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.51■□□□□ 0.71
Slc6a20aQ8VDB9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20aQ8VDB9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20aQ8VDB9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Slc6a20aQ8VDB9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20aQ8VDB9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20aQ8VDB9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Slc6a20aQ8VDB9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a20aQ8VDB9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a20aQ8VDB9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.5■□□□□ 0.71
Slc6a20aQ8VDB9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a20aQ8VDB9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a20aQ8VDB9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a20aQ8VDB9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a20aQ8VDB9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
Slc6a20aQ8VDB9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a20aQ8VDB9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a20aQ8VDB9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Slc6a20aQ8VDB9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.49■□□□□ 0.71
Slc6a20aQ8VDB9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a20aQ8VDB9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Slc6a20aQ8VDB9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a20aQ8VDB9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms