Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps39Q8R5L3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps39Q8R5L3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps39Q8R5L3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps39Q8R5L3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps39Q8R5L3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps39Q8R5L3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Vps39Q8R5L3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.83■□□□□ 0.77
Vps39Q8R5L3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Vps39Q8R5L3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps39Q8R5L3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Vps39Q8R5L3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Vps39Q8R5L3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps39Q8R5L3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vps39Q8R5L3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps39Q8R5L3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps39Q8R5L3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps39Q8R5L3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.82■□□□□ 0.76
Vps39Q8R5L3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vps39Q8R5L3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps39Q8R5L3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.82■□□□□ 0.76
Vps39Q8R5L3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vps39Q8R5L3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
Vps39Q8R5L3 Gm9959-201ENSMUST00000068277 390 ntBASIC19.82■□□□□ 0.76
Vps39Q8R5L3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps39Q8R5L3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps39Q8R5L3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps39Q8R5L3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps39Q8R5L3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Vps39Q8R5L3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps39Q8R5L3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps39Q8R5L3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps39Q8R5L3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps39Q8R5L3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps39Q8R5L3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps39Q8R5L3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.8■□□□□ 0.76
Vps39Q8R5L3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.8■□□□□ 0.76
Vps39Q8R5L3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps39Q8R5L3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Vps39Q8R5L3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.8■□□□□ 0.76
Vps39Q8R5L3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps39Q8R5L3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps39Q8R5L3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vps39Q8R5L3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps39Q8R5L3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps39Q8R5L3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps39Q8R5L3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Vps39Q8R5L3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps39Q8R5L3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Vps39Q8R5L3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps39Q8R5L3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps39Q8R5L3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vps39Q8R5L3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps39Q8R5L3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps39Q8R5L3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps39Q8R5L3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps39Q8R5L3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Vps39Q8R5L3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps39Q8R5L3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Vps39Q8R5L3 Gm22238-201ENSMUST00000175222 88 ntBASIC19.78■□□□□ 0.76
Vps39Q8R5L3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.78■□□□□ 0.76
Vps39Q8R5L3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Vps39Q8R5L3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.78■□□□□ 0.76
Vps39Q8R5L3 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.78■□□□□ 0.76
Vps39Q8R5L3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps39Q8R5L3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps39Q8R5L3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps39Q8R5L3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Vps39Q8R5L3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Vps39Q8R5L3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps39Q8R5L3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps39Q8R5L3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Vps39Q8R5L3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps39Q8R5L3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vps39Q8R5L3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps39Q8R5L3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Vps39Q8R5L3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps39Q8R5L3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Vps39Q8R5L3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps39Q8R5L3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Vps39Q8R5L3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps39Q8R5L3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps39Q8R5L3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps39Q8R5L3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps39Q8R5L3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vps39Q8R5L3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Vps39Q8R5L3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vps39Q8R5L3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.75■□□□□ 0.75
Vps39Q8R5L3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps39Q8R5L3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps39Q8R5L3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vps39Q8R5L3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps39Q8R5L3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Vps39Q8R5L3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.74■□□□□ 0.75
Vps39Q8R5L3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Vps39Q8R5L3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.74■□□□□ 0.75
Vps39Q8R5L3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps39Q8R5L3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps39Q8R5L3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps39Q8R5L3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms