Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh3kbp1Q8R550 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Sh3kbp1Q8R550 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.4■□□□□ 0.86
Sh3kbp1Q8R550 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh3kbp1Q8R550 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Sh3kbp1Q8R550 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sh3kbp1Q8R550 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sh3kbp1Q8R550 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.39■□□□□ 0.86
Sh3kbp1Q8R550 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sh3kbp1Q8R550 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sh3kbp1Q8R550 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sh3kbp1Q8R550 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sh3kbp1Q8R550 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sh3kbp1Q8R550 Gm43530-201ENSMUST00000195920 274 ntBASIC20.39■□□□□ 0.85
Sh3kbp1Q8R550 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
Sh3kbp1Q8R550 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sh3kbp1Q8R550 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.39■□□□□ 0.85
Sh3kbp1Q8R550 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sh3kbp1Q8R550 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh3kbp1Q8R550 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Sh3kbp1Q8R550 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh3kbp1Q8R550 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh3kbp1Q8R550 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sh3kbp1Q8R550 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh3kbp1Q8R550 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Sh3kbp1Q8R550 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sh3kbp1Q8R550 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh3kbp1Q8R550 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh3kbp1Q8R550 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sh3kbp1Q8R550 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh3kbp1Q8R550 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh3kbp1Q8R550 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh3kbp1Q8R550 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh3kbp1Q8R550 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh3kbp1Q8R550 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Sh3kbp1Q8R550 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh3kbp1Q8R550 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh3kbp1Q8R550 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3kbp1Q8R550 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3kbp1Q8R550 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3kbp1Q8R550 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3kbp1Q8R550 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3kbp1Q8R550 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.36■□□□□ 0.85
Sh3kbp1Q8R550 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Sh3kbp1Q8R550 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3kbp1Q8R550 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3kbp1Q8R550 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Sh3kbp1Q8R550 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3kbp1Q8R550 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3kbp1Q8R550 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3kbp1Q8R550 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3kbp1Q8R550 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3kbp1Q8R550 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Sh3kbp1Q8R550 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3kbp1Q8R550 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3kbp1Q8R550 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Sh3kbp1Q8R550 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3kbp1Q8R550 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3kbp1Q8R550 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.35■□□□□ 0.85
Sh3kbp1Q8R550 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3kbp1Q8R550 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.35■□□□□ 0.85
Sh3kbp1Q8R550 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.35■□□□□ 0.85
Sh3kbp1Q8R550 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3kbp1Q8R550 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3kbp1Q8R550 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3kbp1Q8R550 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3kbp1Q8R550 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3kbp1Q8R550 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3kbp1Q8R550 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3kbp1Q8R550 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3kbp1Q8R550 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3kbp1Q8R550 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.34■□□□□ 0.85
Sh3kbp1Q8R550 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3kbp1Q8R550 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.34■□□□□ 0.85
Sh3kbp1Q8R550 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3kbp1Q8R550 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3kbp1Q8R550 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3kbp1Q8R550 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3kbp1Q8R550 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3kbp1Q8R550 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Sh3kbp1Q8R550 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Sh3kbp1Q8R550 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Sh3kbp1Q8R550 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh3kbp1Q8R550 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh3kbp1Q8R550 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh3kbp1Q8R550 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh3kbp1Q8R550 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3kbp1Q8R550 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3kbp1Q8R550 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3kbp1Q8R550 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.32■□□□□ 0.84
Sh3kbp1Q8R550 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.32■□□□□ 0.84
Sh3kbp1Q8R550 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Sh3kbp1Q8R550 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.32■□□□□ 0.84
Sh3kbp1Q8R550 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3kbp1Q8R550 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
Sh3kbp1Q8R550 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3kbp1Q8R550 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3kbp1Q8R550 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Sh3kbp1Q8R550 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Sh3kbp1Q8R550 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms