Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nup58Q8R332 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nup58Q8R332 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nup58Q8R332 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nup58Q8R332 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.16■□□□□ 0.98
Nup58Q8R332 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nup58Q8R332 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.16■□□□□ 0.98
Nup58Q8R332 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nup58Q8R332 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nup58Q8R332 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nup58Q8R332 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nup58Q8R332 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nup58Q8R332 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nup58Q8R332 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nup58Q8R332 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nup58Q8R332 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.15■□□□□ 0.98
Nup58Q8R332 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Nup58Q8R332 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nup58Q8R332 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nup58Q8R332 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.15■□□□□ 0.98
Nup58Q8R332 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Nup58Q8R332 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nup58Q8R332 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nup58Q8R332 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nup58Q8R332 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.14■□□□□ 0.97
Nup58Q8R332 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nup58Q8R332 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nup58Q8R332 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nup58Q8R332 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nup58Q8R332 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nup58Q8R332 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Nup58Q8R332 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nup58Q8R332 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nup58Q8R332 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.13■□□□□ 0.97
Nup58Q8R332 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.13■□□□□ 0.97
Nup58Q8R332 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Nup58Q8R332 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nup58Q8R332 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nup58Q8R332 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nup58Q8R332 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.12■□□□□ 0.97
Nup58Q8R332 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nup58Q8R332 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nup58Q8R332 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.12■□□□□ 0.97
Nup58Q8R332 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nup58Q8R332 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nup58Q8R332 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.11■□□□□ 0.97
Nup58Q8R332 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Nup58Q8R332 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nup58Q8R332 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nup58Q8R332 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nup58Q8R332 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup58Q8R332 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Nup58Q8R332 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nup58Q8R332 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Nup58Q8R332 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup58Q8R332 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup58Q8R332 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.1■□□□□ 0.97
Nup58Q8R332 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup58Q8R332 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup58Q8R332 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup58Q8R332 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup58Q8R332 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup58Q8R332 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup58Q8R332 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup58Q8R332 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup58Q8R332 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Nup58Q8R332 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.09■□□□□ 0.97
Nup58Q8R332 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup58Q8R332 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.09■□□□□ 0.97
Nup58Q8R332 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup58Q8R332 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nup58Q8R332 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nup58Q8R332 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup58Q8R332 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup58Q8R332 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.08■□□□□ 0.97
Nup58Q8R332 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nup58Q8R332 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nup58Q8R332 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.08■□□□□ 0.97
Nup58Q8R332 Gm22238-201ENSMUST00000175222 88 ntBASIC21.08■□□□□ 0.97
Nup58Q8R332 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.08■□□□□ 0.97
Nup58Q8R332 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nup58Q8R332 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Nup58Q8R332 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Nup58Q8R332 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup58Q8R332 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.07■□□□□ 0.96
Nup58Q8R332 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup58Q8R332 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nup58Q8R332 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nup58Q8R332 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup58Q8R332 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.07■□□□□ 0.96
Nup58Q8R332 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nup58Q8R332 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup58Q8R332 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nup58Q8R332 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nup58Q8R332 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.06■□□□□ 0.96
Nup58Q8R332 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.06■□□□□ 0.96
Nup58Q8R332 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nup58Q8R332 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nup58Q8R332 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nup58Q8R332 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms