Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pspc1Q8R326 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pspc1Q8R326 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pspc1Q8R326 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Pspc1Q8R326 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.88■■□□□ 1.25
Pspc1Q8R326 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pspc1Q8R326 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Pspc1Q8R326 Gm11421-201ENSMUST00000122124 294 ntBASIC22.88■■□□□ 1.25
Pspc1Q8R326 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.88■■□□□ 1.25
Pspc1Q8R326 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.88■■□□□ 1.25
Pspc1Q8R326 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pspc1Q8R326 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pspc1Q8R326 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pspc1Q8R326 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pspc1Q8R326 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pspc1Q8R326 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Pspc1Q8R326 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pspc1Q8R326 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pspc1Q8R326 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
Pspc1Q8R326 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.87■■□□□ 1.25
Pspc1Q8R326 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pspc1Q8R326 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pspc1Q8R326 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.87■■□□□ 1.25
Pspc1Q8R326 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.87■■□□□ 1.25
Pspc1Q8R326 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.87■■□□□ 1.25
Pspc1Q8R326 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pspc1Q8R326 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pspc1Q8R326 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Pspc1Q8R326 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pspc1Q8R326 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Pspc1Q8R326 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pspc1Q8R326 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.87■■□□□ 1.25
Pspc1Q8R326 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.86■■□□□ 1.25
Pspc1Q8R326 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Pspc1Q8R326 Hsf1-207ENSMUST00000228371 2102 ntBASIC22.86■■□□□ 1.25
Pspc1Q8R326 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pspc1Q8R326 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pspc1Q8R326 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pspc1Q8R326 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Pspc1Q8R326 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pspc1Q8R326 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Pspc1Q8R326 Gm42642-201ENSMUST00000200683 355 ntBASIC22.85■■□□□ 1.25
Pspc1Q8R326 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pspc1Q8R326 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pspc1Q8R326 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pspc1Q8R326 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pspc1Q8R326 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Pspc1Q8R326 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.84■■□□□ 1.25
Pspc1Q8R326 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pspc1Q8R326 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pspc1Q8R326 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pspc1Q8R326 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pspc1Q8R326 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pspc1Q8R326 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pspc1Q8R326 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pspc1Q8R326 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pspc1Q8R326 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pspc1Q8R326 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pspc1Q8R326 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pspc1Q8R326 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pspc1Q8R326 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Pspc1Q8R326 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pspc1Q8R326 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pspc1Q8R326 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pspc1Q8R326 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.82■■□□□ 1.24
Pspc1Q8R326 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.82■■□□□ 1.24
Pspc1Q8R326 Gm26571-201ENSMUST00000181399 666 ntBASIC22.82■■□□□ 1.24
Pspc1Q8R326 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pspc1Q8R326 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pspc1Q8R326 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pspc1Q8R326 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pspc1Q8R326 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pspc1Q8R326 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pspc1Q8R326 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pspc1Q8R326 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pspc1Q8R326 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pspc1Q8R326 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Pspc1Q8R326 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pspc1Q8R326 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pspc1Q8R326 Gm7291-201ENSMUST00000199147 382 ntBASIC22.79■■□□□ 1.24
Pspc1Q8R326 Gm42569-201ENSMUST00000200539 472 ntBASIC22.79■■□□□ 1.24
Pspc1Q8R326 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC22.79■■□□□ 1.24
Pspc1Q8R326 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pspc1Q8R326 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pspc1Q8R326 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pspc1Q8R326 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pspc1Q8R326 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pspc1Q8R326 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Pspc1Q8R326 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pspc1Q8R326 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pspc1Q8R326 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Pspc1Q8R326 Gm5297-201ENSMUST00000198555 1171 ntBASIC22.78■■□□□ 1.24
Pspc1Q8R326 AC137127.1-201ENSMUST00000213466 1078 ntBASIC22.78■■□□□ 1.24
Pspc1Q8R326 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Pspc1Q8R326 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pspc1Q8R326 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pspc1Q8R326 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC22.77■■□□□ 1.24
Pspc1Q8R326 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pspc1Q8R326 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pspc1Q8R326 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms