Protein–RNA interactions for Protein: Q8R316

Hbp1, HMG box-containing protein 1, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbp1Q8R316 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Hbp1Q8R316 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Hbp1Q8R316 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hbp1Q8R316 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hbp1Q8R316 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hbp1Q8R316 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hbp1Q8R316 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hbp1Q8R316 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.65■□□□□ 0.74
Hbp1Q8R316 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hbp1Q8R316 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hbp1Q8R316 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.65■□□□□ 0.74
Hbp1Q8R316 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hbp1Q8R316 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Hbp1Q8R316 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hbp1Q8R316 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
Hbp1Q8R316 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Hbp1Q8R316 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Hbp1Q8R316 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hbp1Q8R316 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
Hbp1Q8R316 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hbp1Q8R316 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hbp1Q8R316 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hbp1Q8R316 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.63■□□□□ 0.73
Hbp1Q8R316 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hbp1Q8R316 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hbp1Q8R316 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hbp1Q8R316 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hbp1Q8R316 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hbp1Q8R316 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.63■□□□□ 0.73
Hbp1Q8R316 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hbp1Q8R316 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hbp1Q8R316 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hbp1Q8R316 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hbp1Q8R316 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hbp1Q8R316 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.62■□□□□ 0.73
Hbp1Q8R316 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hbp1Q8R316 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hbp1Q8R316 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hbp1Q8R316 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hbp1Q8R316 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hbp1Q8R316 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hbp1Q8R316 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.62■□□□□ 0.73
Hbp1Q8R316 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hbp1Q8R316 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hbp1Q8R316 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.61■□□□□ 0.73
Hbp1Q8R316 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hbp1Q8R316 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hbp1Q8R316 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hbp1Q8R316 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hbp1Q8R316 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.6■□□□□ 0.73
Hbp1Q8R316 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hbp1Q8R316 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hbp1Q8R316 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hbp1Q8R316 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hbp1Q8R316 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hbp1Q8R316 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hbp1Q8R316 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hbp1Q8R316 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.59■□□□□ 0.73
Hbp1Q8R316 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Hbp1Q8R316 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hbp1Q8R316 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.59■□□□□ 0.73
Hbp1Q8R316 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hbp1Q8R316 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.59■□□□□ 0.73
Hbp1Q8R316 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hbp1Q8R316 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hbp1Q8R316 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Hbp1Q8R316 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hbp1Q8R316 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Hbp1Q8R316 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.58■□□□□ 0.73
Hbp1Q8R316 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hbp1Q8R316 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hbp1Q8R316 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Hbp1Q8R316 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.58■□□□□ 0.72
Hbp1Q8R316 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
Hbp1Q8R316 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.58■□□□□ 0.72
Hbp1Q8R316 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.58■□□□□ 0.72
Hbp1Q8R316 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.58■□□□□ 0.72
Hbp1Q8R316 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hbp1Q8R316 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hbp1Q8R316 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hbp1Q8R316 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.58■□□□□ 0.72
Hbp1Q8R316 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Hbp1Q8R316 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hbp1Q8R316 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Hbp1Q8R316 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hbp1Q8R316 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hbp1Q8R316 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hbp1Q8R316 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hbp1Q8R316 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hbp1Q8R316 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Hbp1Q8R316 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hbp1Q8R316 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Hbp1Q8R316 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hbp1Q8R316 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hbp1Q8R316 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hbp1Q8R316 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hbp1Q8R316 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Hbp1Q8R316 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hbp1Q8R316 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hbp1Q8R316 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms