Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf2Q8R1J1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf2Q8R1J1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf2Q8R1J1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tm6sf2Q8R1J1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.64■□□□□ 0.57
Tm6sf2Q8R1J1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
Tm6sf2Q8R1J1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.64■□□□□ 0.57
Tm6sf2Q8R1J1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tm6sf2Q8R1J1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tm6sf2Q8R1J1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tm6sf2Q8R1J1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tm6sf2Q8R1J1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Tm6sf2Q8R1J1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tm6sf2Q8R1J1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tm6sf2Q8R1J1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tm6sf2Q8R1J1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tm6sf2Q8R1J1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tm6sf2Q8R1J1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Tm6sf2Q8R1J1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Tm6sf2Q8R1J1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.63■□□□□ 0.57
Tm6sf2Q8R1J1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Tm6sf2Q8R1J1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tm6sf2Q8R1J1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Tm6sf2Q8R1J1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.62■□□□□ 0.57
Tm6sf2Q8R1J1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tm6sf2Q8R1J1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tm6sf2Q8R1J1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tm6sf2Q8R1J1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tm6sf2Q8R1J1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tm6sf2Q8R1J1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tm6sf2Q8R1J1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tm6sf2Q8R1J1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Tm6sf2Q8R1J1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tm6sf2Q8R1J1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tm6sf2Q8R1J1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tm6sf2Q8R1J1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tm6sf2Q8R1J1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tm6sf2Q8R1J1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Tm6sf2Q8R1J1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tm6sf2Q8R1J1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Tm6sf2Q8R1J1 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.61■□□□□ 0.57
Tm6sf2Q8R1J1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tm6sf2Q8R1J1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Tm6sf2Q8R1J1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tm6sf2Q8R1J1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tm6sf2Q8R1J1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tm6sf2Q8R1J1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tm6sf2Q8R1J1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tm6sf2Q8R1J1 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.6■□□□□ 0.57
Tm6sf2Q8R1J1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tm6sf2Q8R1J1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tm6sf2Q8R1J1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tm6sf2Q8R1J1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tm6sf2Q8R1J1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tm6sf2Q8R1J1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.59■□□□□ 0.57
Tm6sf2Q8R1J1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tm6sf2Q8R1J1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.59■□□□□ 0.57
Tm6sf2Q8R1J1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tm6sf2Q8R1J1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Tm6sf2Q8R1J1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tm6sf2Q8R1J1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tm6sf2Q8R1J1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tm6sf2Q8R1J1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tm6sf2Q8R1J1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tm6sf2Q8R1J1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tm6sf2Q8R1J1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Tm6sf2Q8R1J1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.58■□□□□ 0.57
Tm6sf2Q8R1J1 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.58■□□□□ 0.56
Tm6sf2Q8R1J1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tm6sf2Q8R1J1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Tm6sf2Q8R1J1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tm6sf2Q8R1J1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tm6sf2Q8R1J1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tm6sf2Q8R1J1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tm6sf2Q8R1J1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tm6sf2Q8R1J1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tm6sf2Q8R1J1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tm6sf2Q8R1J1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Tm6sf2Q8R1J1 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.57■□□□□ 0.56
Tm6sf2Q8R1J1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.57■□□□□ 0.56
Tm6sf2Q8R1J1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tm6sf2Q8R1J1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tm6sf2Q8R1J1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Tm6sf2Q8R1J1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Tm6sf2Q8R1J1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tm6sf2Q8R1J1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tm6sf2Q8R1J1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tm6sf2Q8R1J1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tm6sf2Q8R1J1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tm6sf2Q8R1J1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tm6sf2Q8R1J1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tm6sf2Q8R1J1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.56■□□□□ 0.56
Tm6sf2Q8R1J1 Gm26833-201ENSMUST00000180899 440 ntBASIC18.56■□□□□ 0.56
Tm6sf2Q8R1J1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tm6sf2Q8R1J1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tm6sf2Q8R1J1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tm6sf2Q8R1J1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Tm6sf2Q8R1J1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tm6sf2Q8R1J1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tm6sf2Q8R1J1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms