Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim31Q8R0K2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim31Q8R0K2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim31Q8R0K2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim31Q8R0K2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim31Q8R0K2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim31Q8R0K2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim31Q8R0K2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim31Q8R0K2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim31Q8R0K2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim31Q8R0K2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim31Q8R0K2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim31Q8R0K2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.26■□□□□ 0.67
Trim31Q8R0K2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.26■□□□□ 0.67
Trim31Q8R0K2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim31Q8R0K2 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.26■□□□□ 0.67
Trim31Q8R0K2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Trim31Q8R0K2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim31Q8R0K2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim31Q8R0K2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim31Q8R0K2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim31Q8R0K2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim31Q8R0K2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim31Q8R0K2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trim31Q8R0K2 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.24■□□□□ 0.67
Trim31Q8R0K2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim31Q8R0K2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim31Q8R0K2 Gm43530-201ENSMUST00000195920 274 ntBASIC19.24■□□□□ 0.67
Trim31Q8R0K2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim31Q8R0K2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim31Q8R0K2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim31Q8R0K2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim31Q8R0K2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim31Q8R0K2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trim31Q8R0K2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim31Q8R0K2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim31Q8R0K2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim31Q8R0K2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim31Q8R0K2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim31Q8R0K2 Gm12821-201ENSMUST00000120022 600 ntBASIC19.23■□□□□ 0.67
Trim31Q8R0K2 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.23■□□□□ 0.67
Trim31Q8R0K2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Trim31Q8R0K2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim31Q8R0K2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim31Q8R0K2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim31Q8R0K2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim31Q8R0K2 Golph3-202ENSMUST00000226517 2359 ntBASIC19.22■□□□□ 0.67
Trim31Q8R0K2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim31Q8R0K2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim31Q8R0K2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim31Q8R0K2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim31Q8R0K2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim31Q8R0K2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim31Q8R0K2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim31Q8R0K2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim31Q8R0K2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim31Q8R0K2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trim31Q8R0K2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim31Q8R0K2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim31Q8R0K2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trim31Q8R0K2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim31Q8R0K2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim31Q8R0K2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim31Q8R0K2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.21■□□□□ 0.67
Trim31Q8R0K2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.21■□□□□ 0.67
Trim31Q8R0K2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
Trim31Q8R0K2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Trim31Q8R0K2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim31Q8R0K2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.2■□□□□ 0.66
Trim31Q8R0K2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim31Q8R0K2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim31Q8R0K2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim31Q8R0K2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim31Q8R0K2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim31Q8R0K2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim31Q8R0K2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.19■□□□□ 0.66
Trim31Q8R0K2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim31Q8R0K2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim31Q8R0K2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim31Q8R0K2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim31Q8R0K2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim31Q8R0K2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim31Q8R0K2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms