Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rfwd3Q8CIK8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd3Q8CIK8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rfwd3Q8CIK8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd3Q8CIK8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd3Q8CIK8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd3Q8CIK8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd3Q8CIK8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd3Q8CIK8 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.55■□□□□ 0.56
Rfwd3Q8CIK8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd3Q8CIK8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rfwd3Q8CIK8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd3Q8CIK8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Rfwd3Q8CIK8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd3Q8CIK8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd3Q8CIK8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.54■□□□□ 0.56
Rfwd3Q8CIK8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd3Q8CIK8 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.54■□□□□ 0.56
Rfwd3Q8CIK8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
Rfwd3Q8CIK8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd3Q8CIK8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd3Q8CIK8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd3Q8CIK8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd3Q8CIK8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd3Q8CIK8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Rfwd3Q8CIK8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd3Q8CIK8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rfwd3Q8CIK8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd3Q8CIK8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rfwd3Q8CIK8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd3Q8CIK8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.53■□□□□ 0.56
Rfwd3Q8CIK8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd3Q8CIK8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd3Q8CIK8 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.53■□□□□ 0.56
Rfwd3Q8CIK8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.53■□□□□ 0.56
Rfwd3Q8CIK8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd3Q8CIK8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd3Q8CIK8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd3Q8CIK8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd3Q8CIK8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd3Q8CIK8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd3Q8CIK8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfwd3Q8CIK8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Rfwd3Q8CIK8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfwd3Q8CIK8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfwd3Q8CIK8 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.52■□□□□ 0.56
Rfwd3Q8CIK8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.52■□□□□ 0.56
Rfwd3Q8CIK8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.52■□□□□ 0.56
Rfwd3Q8CIK8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.52■□□□□ 0.56
Rfwd3Q8CIK8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Rfwd3Q8CIK8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rfwd3Q8CIK8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rfwd3Q8CIK8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rfwd3Q8CIK8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rfwd3Q8CIK8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rfwd3Q8CIK8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfwd3Q8CIK8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfwd3Q8CIK8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.51■□□□□ 0.55
Rfwd3Q8CIK8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rfwd3Q8CIK8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rfwd3Q8CIK8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd3Q8CIK8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd3Q8CIK8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd3Q8CIK8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.5■□□□□ 0.55
Rfwd3Q8CIK8 Gm27454-201ENSMUST00000185090 204 ntBASIC18.5■□□□□ 0.55
Rfwd3Q8CIK8 Gm43137-201ENSMUST00000198052 594 ntBASIC18.5■□□□□ 0.55
Rfwd3Q8CIK8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd3Q8CIK8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd3Q8CIK8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd3Q8CIK8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd3Q8CIK8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd3Q8CIK8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd3Q8CIK8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfwd3Q8CIK8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfwd3Q8CIK8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.49■□□□□ 0.55
Rfwd3Q8CIK8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rfwd3Q8CIK8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfwd3Q8CIK8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rfwd3Q8CIK8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfwd3Q8CIK8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.49■□□□□ 0.55
Rfwd3Q8CIK8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.49■□□□□ 0.55
Rfwd3Q8CIK8 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.49■□□□□ 0.55
Rfwd3Q8CIK8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.49■□□□□ 0.55
Rfwd3Q8CIK8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfwd3Q8CIK8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfwd3Q8CIK8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.48■□□□□ 0.55
Rfwd3Q8CIK8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfwd3Q8CIK8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfwd3Q8CIK8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfwd3Q8CIK8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfwd3Q8CIK8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfwd3Q8CIK8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rfwd3Q8CIK8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.48■□□□□ 0.55
Rfwd3Q8CIK8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.48■□□□□ 0.55
Rfwd3Q8CIK8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfwd3Q8CIK8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rfwd3Q8CIK8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfwd3Q8CIK8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfwd3Q8CIK8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfwd3Q8CIK8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms