Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pdlim5Q8CI51 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pdlim5Q8CI51 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim5Q8CI51 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim5Q8CI51 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
Pdlim5Q8CI51 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Pdlim5Q8CI51 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim5Q8CI51 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.25■□□□□ 0.51
Pdlim5Q8CI51 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.25■□□□□ 0.51
Pdlim5Q8CI51 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pdlim5Q8CI51 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim5Q8CI51 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim5Q8CI51 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim5Q8CI51 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.25■□□□□ 0.51
Pdlim5Q8CI51 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim5Q8CI51 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim5Q8CI51 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim5Q8CI51 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pdlim5Q8CI51 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim5Q8CI51 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Pdlim5Q8CI51 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim5Q8CI51 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim5Q8CI51 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim5Q8CI51 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.24■□□□□ 0.51
Pdlim5Q8CI51 Mir6236-201ENSMUST00000184437 123 ntBASIC18.24■□□□□ 0.51
Pdlim5Q8CI51 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim5Q8CI51 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim5Q8CI51 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim5Q8CI51 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim5Q8CI51 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pdlim5Q8CI51 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pdlim5Q8CI51 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim5Q8CI51 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim5Q8CI51 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim5Q8CI51 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
Pdlim5Q8CI51 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim5Q8CI51 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim5Q8CI51 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim5Q8CI51 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pdlim5Q8CI51 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim5Q8CI51 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pdlim5Q8CI51 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pdlim5Q8CI51 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.22■□□□□ 0.51
Pdlim5Q8CI51 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim5Q8CI51 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim5Q8CI51 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim5Q8CI51 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim5Q8CI51 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim5Q8CI51 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim5Q8CI51 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim5Q8CI51 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.21■□□□□ 0.51
Pdlim5Q8CI51 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim5Q8CI51 Gm22238-201ENSMUST00000175222 88 ntBASIC18.21■□□□□ 0.51
Pdlim5Q8CI51 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.21■□□□□ 0.51
Pdlim5Q8CI51 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim5Q8CI51 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim5Q8CI51 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.21■□□□□ 0.51
Pdlim5Q8CI51 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim5Q8CI51 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.21■□□□□ 0.5
Pdlim5Q8CI51 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim5Q8CI51 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim5Q8CI51 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim5Q8CI51 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim5Q8CI51 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim5Q8CI51 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim5Q8CI51 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim5Q8CI51 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pdlim5Q8CI51 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.2■□□□□ 0.5
Pdlim5Q8CI51 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.2■□□□□ 0.5
Pdlim5Q8CI51 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.2■□□□□ 0.5
Pdlim5Q8CI51 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pdlim5Q8CI51 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim5Q8CI51 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim5Q8CI51 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim5Q8CI51 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim5Q8CI51 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim5Q8CI51 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim5Q8CI51 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim5Q8CI51 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim5Q8CI51 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim5Q8CI51 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim5Q8CI51 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim5Q8CI51 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Gm45102-201ENSMUST00000207427 857 ntBASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim5Q8CI51 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms