Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rp1l1Q8CGM2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rp1l1Q8CGM2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Rp1l1Q8CGM2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Rp1l1Q8CGM2 Gm37856-201ENSMUST00000191634 999 ntBASIC21.05■□□□□ 0.96
Rp1l1Q8CGM2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Rp1l1Q8CGM2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rp1l1Q8CGM2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.05■□□□□ 0.96
Rp1l1Q8CGM2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.05■□□□□ 0.96
Rp1l1Q8CGM2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rp1l1Q8CGM2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rp1l1Q8CGM2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rp1l1Q8CGM2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rp1l1Q8CGM2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rp1l1Q8CGM2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rp1l1Q8CGM2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.04■□□□□ 0.96
Rp1l1Q8CGM2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Rp1l1Q8CGM2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rp1l1Q8CGM2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rp1l1Q8CGM2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rp1l1Q8CGM2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rp1l1Q8CGM2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Rp1l1Q8CGM2 Gm7290-201ENSMUST00000104990 617 ntBASIC21.03■□□□□ 0.96
Rp1l1Q8CGM2 Gm12918-201ENSMUST00000120234 636 ntBASIC21.03■□□□□ 0.96
Rp1l1Q8CGM2 Gm15710-201ENSMUST00000121821 636 ntBASIC21.03■□□□□ 0.96
Rp1l1Q8CGM2 Gm5075-201ENSMUST00000196916 622 ntBASIC21.03■□□□□ 0.96
Rp1l1Q8CGM2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.03■□□□□ 0.96
Rp1l1Q8CGM2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.03■□□□□ 0.96
Rp1l1Q8CGM2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rp1l1Q8CGM2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rp1l1Q8CGM2 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.03■□□□□ 0.96
Rp1l1Q8CGM2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rp1l1Q8CGM2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rp1l1Q8CGM2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Rp1l1Q8CGM2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Rp1l1Q8CGM2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rp1l1Q8CGM2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rp1l1Q8CGM2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rp1l1Q8CGM2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rp1l1Q8CGM2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.01■□□□□ 0.95
Rp1l1Q8CGM2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rp1l1Q8CGM2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rp1l1Q8CGM2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rp1l1Q8CGM2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rp1l1Q8CGM2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rp1l1Q8CGM2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rp1l1Q8CGM2 Gm22325-201ENSMUST00000158904 308 ntBASIC21■□□□□ 0.95
Rp1l1Q8CGM2 Gm3807-201ENSMUST00000193520 1168 ntBASIC21■□□□□ 0.95
Rp1l1Q8CGM2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21■□□□□ 0.95
Rp1l1Q8CGM2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rp1l1Q8CGM2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rp1l1Q8CGM2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.99■□□□□ 0.95
Rp1l1Q8CGM2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Rp1l1Q8CGM2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rp1l1Q8CGM2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rp1l1Q8CGM2 Gm6420-201ENSMUST00000193885 723 ntBASIC20.99■□□□□ 0.95
Rp1l1Q8CGM2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rp1l1Q8CGM2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Rp1l1Q8CGM2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rp1l1Q8CGM2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.99■□□□□ 0.95
Rp1l1Q8CGM2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rp1l1Q8CGM2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rp1l1Q8CGM2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rp1l1Q8CGM2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rp1l1Q8CGM2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rp1l1Q8CGM2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.98■□□□□ 0.95
Rp1l1Q8CGM2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.98■□□□□ 0.95
Rp1l1Q8CGM2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rp1l1Q8CGM2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rp1l1Q8CGM2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rp1l1Q8CGM2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rp1l1Q8CGM2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.97■□□□□ 0.95
Rp1l1Q8CGM2 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.97■□□□□ 0.95
Rp1l1Q8CGM2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rp1l1Q8CGM2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.97■□□□□ 0.95
Rp1l1Q8CGM2 Gm6365-201ENSMUST00000054711 744 ntBASIC20.96■□□□□ 0.95
Rp1l1Q8CGM2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rp1l1Q8CGM2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.96■□□□□ 0.95
Rp1l1Q8CGM2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.96■□□□□ 0.95
Rp1l1Q8CGM2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.96■□□□□ 0.95
Rp1l1Q8CGM2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rp1l1Q8CGM2 Gm10812-201ENSMUST00000099864 546 ntBASIC20.96■□□□□ 0.95
Rp1l1Q8CGM2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Rp1l1Q8CGM2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.95■□□□□ 0.94
Rp1l1Q8CGM2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rp1l1Q8CGM2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Rp1l1Q8CGM2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.95■□□□□ 0.94
Rp1l1Q8CGM2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rp1l1Q8CGM2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Rp1l1Q8CGM2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rp1l1Q8CGM2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.95■□□□□ 0.94
Rp1l1Q8CGM2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.94■□□□□ 0.94
Rp1l1Q8CGM2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rp1l1Q8CGM2 Gm38205-201ENSMUST00000192243 258 ntBASIC20.94■□□□□ 0.94
Rp1l1Q8CGM2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rp1l1Q8CGM2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Rp1l1Q8CGM2 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.94■□□□□ 0.94
Rp1l1Q8CGM2 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.94■□□□□ 0.94
Rp1l1Q8CGM2 Trmt13-210ENSMUST00000198454 880 ntBASIC20.94■□□□□ 0.94
Rp1l1Q8CGM2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms