Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rbm28Q8CGC6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rbm28Q8CGC6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Rbm28Q8CGC6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
Rbm28Q8CGC6 Smad6-203ENSMUST00000179458 273 ntBASIC23.4■■□□□ 1.34
Rbm28Q8CGC6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
Rbm28Q8CGC6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rbm28Q8CGC6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rbm28Q8CGC6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rbm28Q8CGC6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rbm28Q8CGC6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rbm28Q8CGC6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Rbm28Q8CGC6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rbm28Q8CGC6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC23.39■■□□□ 1.34
Rbm28Q8CGC6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Rbm28Q8CGC6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Rbm28Q8CGC6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Rbm28Q8CGC6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Rbm28Q8CGC6 Gm40848-201ENSMUST00000221998 324 ntBASIC23.39■■□□□ 1.33
Rbm28Q8CGC6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Rbm28Q8CGC6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rbm28Q8CGC6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Rbm28Q8CGC6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rbm28Q8CGC6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rbm28Q8CGC6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rbm28Q8CGC6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Rbm28Q8CGC6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Rbm28Q8CGC6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC23.38■■□□□ 1.33
Rbm28Q8CGC6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rbm28Q8CGC6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Rbm28Q8CGC6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Rbm28Q8CGC6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rbm28Q8CGC6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rbm28Q8CGC6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rbm28Q8CGC6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rbm28Q8CGC6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Rbm28Q8CGC6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.37■■□□□ 1.33
Rbm28Q8CGC6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rbm28Q8CGC6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Rbm28Q8CGC6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rbm28Q8CGC6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC23.37■■□□□ 1.33
Rbm28Q8CGC6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Rbm28Q8CGC6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rbm28Q8CGC6 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.37■■□□□ 1.33
Rbm28Q8CGC6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC23.37■■□□□ 1.33
Rbm28Q8CGC6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rbm28Q8CGC6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rbm28Q8CGC6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC23.36■■□□□ 1.33
Rbm28Q8CGC6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rbm28Q8CGC6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rbm28Q8CGC6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.36■■□□□ 1.33
Rbm28Q8CGC6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rbm28Q8CGC6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC23.36■■□□□ 1.33
Rbm28Q8CGC6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.36■■□□□ 1.33
Rbm28Q8CGC6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rbm28Q8CGC6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rbm28Q8CGC6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rbm28Q8CGC6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC23.36■■□□□ 1.33
Rbm28Q8CGC6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rbm28Q8CGC6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC23.35■■□□□ 1.33
Rbm28Q8CGC6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rbm28Q8CGC6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rbm28Q8CGC6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rbm28Q8CGC6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rbm28Q8CGC6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rbm28Q8CGC6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
Rbm28Q8CGC6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
Rbm28Q8CGC6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rbm28Q8CGC6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC23.34■■□□□ 1.33
Rbm28Q8CGC6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rbm28Q8CGC6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rbm28Q8CGC6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rbm28Q8CGC6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rbm28Q8CGC6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rbm28Q8CGC6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rbm28Q8CGC6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Rbm28Q8CGC6 Mir6236-201ENSMUST00000184437 123 ntBASIC23.33■■□□□ 1.33
Rbm28Q8CGC6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rbm28Q8CGC6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rbm28Q8CGC6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rbm28Q8CGC6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rbm28Q8CGC6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC23.33■■□□□ 1.32
Rbm28Q8CGC6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rbm28Q8CGC6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rbm28Q8CGC6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
Rbm28Q8CGC6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rbm28Q8CGC6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rbm28Q8CGC6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rbm28Q8CGC6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.32■■□□□ 1.32
Rbm28Q8CGC6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.32■■□□□ 1.32
Rbm28Q8CGC6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rbm28Q8CGC6 Gm10493-201ENSMUST00000097270 612 ntBASIC23.32■■□□□ 1.32
Rbm28Q8CGC6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rbm28Q8CGC6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rbm28Q8CGC6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Rbm28Q8CGC6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rbm28Q8CGC6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.31■■□□□ 1.32
Rbm28Q8CGC6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
Rbm28Q8CGC6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rbm28Q8CGC6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms