Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Brf1Q8CFK2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Brf1Q8CFK2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Brf1Q8CFK2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Brf1Q8CFK2 Gm43909-201ENSMUST00000203443 1876 ntBASIC24■■□□□ 1.43
Brf1Q8CFK2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC24■■□□□ 1.43
Brf1Q8CFK2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Brf1Q8CFK2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC24■■□□□ 1.43
Brf1Q8CFK2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Brf1Q8CFK2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC24■■□□□ 1.43
Brf1Q8CFK2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC23.99■■□□□ 1.43
Brf1Q8CFK2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.99■■□□□ 1.43
Brf1Q8CFK2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Brf1Q8CFK2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Brf1Q8CFK2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Brf1Q8CFK2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
Brf1Q8CFK2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Brf1Q8CFK2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Brf1Q8CFK2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Brf1Q8CFK2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Brf1Q8CFK2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Brf1Q8CFK2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Brf1Q8CFK2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Brf1Q8CFK2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.97■■□□□ 1.43
Brf1Q8CFK2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Brf1Q8CFK2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Brf1Q8CFK2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Brf1Q8CFK2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Brf1Q8CFK2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Brf1Q8CFK2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Brf1Q8CFK2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Brf1Q8CFK2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Brf1Q8CFK2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Brf1Q8CFK2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Brf1Q8CFK2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Brf1Q8CFK2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Brf1Q8CFK2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Brf1Q8CFK2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Brf1Q8CFK2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC23.96■■□□□ 1.43
Brf1Q8CFK2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Brf1Q8CFK2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Brf1Q8CFK2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Brf1Q8CFK2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Brf1Q8CFK2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.96■■□□□ 1.43
Brf1Q8CFK2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Brf1Q8CFK2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Brf1Q8CFK2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.95■■□□□ 1.43
Brf1Q8CFK2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Brf1Q8CFK2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Brf1Q8CFK2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Brf1Q8CFK2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Brf1Q8CFK2 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.95■■□□□ 1.42
Brf1Q8CFK2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Brf1Q8CFK2 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.94■■□□□ 1.42
Brf1Q8CFK2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Brf1Q8CFK2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Brf1Q8CFK2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC23.94■■□□□ 1.42
Brf1Q8CFK2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Brf1Q8CFK2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Brf1Q8CFK2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Brf1Q8CFK2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Brf1Q8CFK2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Brf1Q8CFK2 Gm27454-201ENSMUST00000185090 204 ntBASIC23.93■■□□□ 1.42
Brf1Q8CFK2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Brf1Q8CFK2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Brf1Q8CFK2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Brf1Q8CFK2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Brf1Q8CFK2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Brf1Q8CFK2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Brf1Q8CFK2 Gm10209-201ENSMUST00000203397 1607 ntBASIC23.92■■□□□ 1.42
Brf1Q8CFK2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Brf1Q8CFK2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Brf1Q8CFK2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Brf1Q8CFK2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Brf1Q8CFK2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Brf1Q8CFK2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Brf1Q8CFK2 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.92■■□□□ 1.42
Brf1Q8CFK2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Brf1Q8CFK2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
Brf1Q8CFK2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Brf1Q8CFK2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Brf1Q8CFK2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Brf1Q8CFK2 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.91■■□□□ 1.42
Brf1Q8CFK2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Brf1Q8CFK2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Brf1Q8CFK2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Brf1Q8CFK2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Brf1Q8CFK2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Brf1Q8CFK2 Gm12821-201ENSMUST00000120022 600 ntBASIC23.9■■□□□ 1.42
Brf1Q8CFK2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Brf1Q8CFK2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Brf1Q8CFK2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Brf1Q8CFK2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Brf1Q8CFK2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.9■■□□□ 1.42
Brf1Q8CFK2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Brf1Q8CFK2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.89■■□□□ 1.42
Brf1Q8CFK2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Brf1Q8CFK2 Gm12251-201ENSMUST00000117893 792 ntBASIC23.89■■□□□ 1.41
Brf1Q8CFK2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Brf1Q8CFK2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms