Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC31.57■■■□□ 2.64
Pabpn1Q8CCS6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC31.57■■■□□ 2.64
Pabpn1Q8CCS6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC31.57■■■□□ 2.64
Pabpn1Q8CCS6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Pabpn1Q8CCS6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Pabpn1Q8CCS6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Pabpn1Q8CCS6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC31.56■■■□□ 2.64
Pabpn1Q8CCS6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Pabpn1Q8CCS6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Pabpn1Q8CCS6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
Pabpn1Q8CCS6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Pabpn1Q8CCS6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Pabpn1Q8CCS6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Pabpn1Q8CCS6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Pabpn1Q8CCS6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC31.55■■■□□ 2.64
Pabpn1Q8CCS6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC31.55■■■□□ 2.64
Pabpn1Q8CCS6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC31.55■■■□□ 2.64
Pabpn1Q8CCS6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Pabpn1Q8CCS6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
Pabpn1Q8CCS6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Pabpn1Q8CCS6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC31.54■■■□□ 2.64
Pabpn1Q8CCS6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Pabpn1Q8CCS6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
Pabpn1Q8CCS6 Gm10231-201ENSMUST00000181584 441 ntBASIC31.54■■■□□ 2.64
Pabpn1Q8CCS6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Pabpn1Q8CCS6 Gm10175-202ENSMUST00000208752 441 ntBASIC31.54■■■□□ 2.64
Pabpn1Q8CCS6 AC153881.2-201ENSMUST00000214877 204 ntBASIC31.54■■■□□ 2.64
Pabpn1Q8CCS6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Pabpn1Q8CCS6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
Pabpn1Q8CCS6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC31.54■■■□□ 2.64
Pabpn1Q8CCS6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Pabpn1Q8CCS6 AC153881.1-201ENSMUST00000214448 284 ntBASIC31.53■■■□□ 2.64
Pabpn1Q8CCS6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Pabpn1Q8CCS6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Pabpn1Q8CCS6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
Pabpn1Q8CCS6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Pabpn1Q8CCS6 Gm13534-201ENSMUST00000121169 513 ntBASIC31.52■■■□□ 2.64
Pabpn1Q8CCS6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC31.52■■■□□ 2.64
Pabpn1Q8CCS6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC31.52■■■□□ 2.64
Pabpn1Q8CCS6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Pabpn1Q8CCS6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Pabpn1Q8CCS6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Pabpn1Q8CCS6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
Pabpn1Q8CCS6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Pabpn1Q8CCS6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Pabpn1Q8CCS6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC31.5■■■□□ 2.63
Pabpn1Q8CCS6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC31.5■■■□□ 2.63
Pabpn1Q8CCS6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Pabpn1Q8CCS6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC31.5■■■□□ 2.63
Pabpn1Q8CCS6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Pabpn1Q8CCS6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC31.5■■■□□ 2.63
Pabpn1Q8CCS6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Pabpn1Q8CCS6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
Pabpn1Q8CCS6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Pabpn1Q8CCS6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC31.48■■■□□ 2.63
Pabpn1Q8CCS6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Pabpn1Q8CCS6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Pabpn1Q8CCS6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Pabpn1Q8CCS6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Pabpn1Q8CCS6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
Pabpn1Q8CCS6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Pabpn1Q8CCS6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Pabpn1Q8CCS6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pabpn1Q8CCS6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Pabpn1Q8CCS6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pabpn1Q8CCS6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC31.45■■■□□ 2.63
Pabpn1Q8CCS6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC31.45■■■□□ 2.63
Pabpn1Q8CCS6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Pabpn1Q8CCS6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
Pabpn1Q8CCS6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.62
Pabpn1Q8CCS6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Pabpn1Q8CCS6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Pabpn1Q8CCS6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Pabpn1Q8CCS6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Pabpn1Q8CCS6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Pabpn1Q8CCS6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Pabpn1Q8CCS6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC31.43■■■□□ 2.62
Pabpn1Q8CCS6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
Pabpn1Q8CCS6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pabpn1Q8CCS6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC31.43■■■□□ 2.62
Pabpn1Q8CCS6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Pabpn1Q8CCS6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pabpn1Q8CCS6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pabpn1Q8CCS6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pabpn1Q8CCS6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pabpn1Q8CCS6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Pabpn1Q8CCS6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
Pabpn1Q8CCS6 Gm7367-201ENSMUST00000057611 492 ntBASIC31.42■■■□□ 2.62
Pabpn1Q8CCS6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Pabpn1Q8CCS6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Pabpn1Q8CCS6 Gm38205-201ENSMUST00000192243 258 ntBASIC31.41■■■□□ 2.62
Pabpn1Q8CCS6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Pabpn1Q8CCS6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Pabpn1Q8CCS6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pabpn1Q8CCS6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC31.4■■■□□ 2.62
Pabpn1Q8CCS6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pabpn1Q8CCS6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pabpn1Q8CCS6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pabpn1Q8CCS6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
Pabpn1Q8CCS6 Gm11249-201ENSMUST00000117071 859 ntBASIC31.39■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms