Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Gm43137-201ENSMUST00000198052 594 ntBASIC19.07■□□□□ 0.64
SynpoQ8CC35 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SynpoQ8CC35 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
SynpoQ8CC35 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.07■□□□□ 0.64
SynpoQ8CC35 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SynpoQ8CC35 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.07■□□□□ 0.64
SynpoQ8CC35 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SynpoQ8CC35 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SynpoQ8CC35 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SynpoQ8CC35 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SynpoQ8CC35 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SynpoQ8CC35 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SynpoQ8CC35 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SynpoQ8CC35 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SynpoQ8CC35 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.06■□□□□ 0.64
SynpoQ8CC35 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SynpoQ8CC35 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SynpoQ8CC35 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SynpoQ8CC35 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SynpoQ8CC35 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SynpoQ8CC35 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SynpoQ8CC35 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SynpoQ8CC35 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SynpoQ8CC35 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SynpoQ8CC35 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SynpoQ8CC35 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SynpoQ8CC35 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SynpoQ8CC35 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SynpoQ8CC35 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SynpoQ8CC35 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SynpoQ8CC35 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SynpoQ8CC35 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SynpoQ8CC35 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SynpoQ8CC35 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SynpoQ8CC35 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.04■□□□□ 0.64
SynpoQ8CC35 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SynpoQ8CC35 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.04■□□□□ 0.64
SynpoQ8CC35 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SynpoQ8CC35 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SynpoQ8CC35 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SynpoQ8CC35 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SynpoQ8CC35 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SynpoQ8CC35 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SynpoQ8CC35 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.04■□□□□ 0.64
SynpoQ8CC35 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.04■□□□□ 0.64
SynpoQ8CC35 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SynpoQ8CC35 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SynpoQ8CC35 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SynpoQ8CC35 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SynpoQ8CC35 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SynpoQ8CC35 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SynpoQ8CC35 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SynpoQ8CC35 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SynpoQ8CC35 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SynpoQ8CC35 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SynpoQ8CC35 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SynpoQ8CC35 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SynpoQ8CC35 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SynpoQ8CC35 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SynpoQ8CC35 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SynpoQ8CC35 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SynpoQ8CC35 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
SynpoQ8CC35 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
SynpoQ8CC35 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SynpoQ8CC35 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SynpoQ8CC35 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SynpoQ8CC35 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.01■□□□□ 0.63
SynpoQ8CC35 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SynpoQ8CC35 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SynpoQ8CC35 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.01■□□□□ 0.63
SynpoQ8CC35 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
SynpoQ8CC35 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.01■□□□□ 0.63
SynpoQ8CC35 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SynpoQ8CC35 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SynpoQ8CC35 Iqck-206ENSMUST00000208658 2891 ntBASIC19.01■□□□□ 0.63
SynpoQ8CC35 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SynpoQ8CC35 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SynpoQ8CC35 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SynpoQ8CC35 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19■□□□□ 0.63
SynpoQ8CC35 Mir7075-201ENSMUST00000184187 82 ntBASIC19■□□□□ 0.63
SynpoQ8CC35 Gm6139-201ENSMUST00000079261 882 ntBASIC19■□□□□ 0.63
SynpoQ8CC35 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SynpoQ8CC35 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19■□□□□ 0.63
SynpoQ8CC35 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19■□□□□ 0.63
SynpoQ8CC35 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SynpoQ8CC35 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SynpoQ8CC35 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19■□□□□ 0.63
SynpoQ8CC35 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19■□□□□ 0.63
SynpoQ8CC35 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SynpoQ8CC35 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SynpoQ8CC35 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SynpoQ8CC35 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SynpoQ8CC35 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SynpoQ8CC35 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.99■□□□□ 0.63
SynpoQ8CC35 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SynpoQ8CC35 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SynpoQ8CC35 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.99■□□□□ 0.63
SynpoQ8CC35 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SynpoQ8CC35 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SynpoQ8CC35 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms