Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.84■□□□□ 0.61
Eri3Q8C460 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Eri3Q8C460 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Eri3Q8C460 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Eri3Q8C460 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Eri3Q8C460 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Eri3Q8C460 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Eri3Q8C460 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Eri3Q8C460 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Eri3Q8C460 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Eri3Q8C460 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Eri3Q8C460 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Eri3Q8C460 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.83■□□□□ 0.6
Eri3Q8C460 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.6
Eri3Q8C460 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
Eri3Q8C460 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Eri3Q8C460 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Eri3Q8C460 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
Eri3Q8C460 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Eri3Q8C460 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Eri3Q8C460 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Eri3Q8C460 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Eri3Q8C460 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Eri3Q8C460 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Eri3Q8C460 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.82■□□□□ 0.6
Eri3Q8C460 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Eri3Q8C460 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Eri3Q8C460 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Eri3Q8C460 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Eri3Q8C460 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Eri3Q8C460 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Eri3Q8C460 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Eri3Q8C460 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Eri3Q8C460 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Eri3Q8C460 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Eri3Q8C460 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.81■□□□□ 0.6
Eri3Q8C460 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Eri3Q8C460 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Eri3Q8C460 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Eri3Q8C460 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.81■□□□□ 0.6
Eri3Q8C460 Gm43137-201ENSMUST00000198052 594 ntBASIC18.81■□□□□ 0.6
Eri3Q8C460 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Eri3Q8C460 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Eri3Q8C460 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Eri3Q8C460 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Eri3Q8C460 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Eri3Q8C460 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.8■□□□□ 0.6
Eri3Q8C460 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Eri3Q8C460 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Eri3Q8C460 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Eri3Q8C460 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Eri3Q8C460 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Eri3Q8C460 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Eri3Q8C460 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Eri3Q8C460 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.8■□□□□ 0.6
Eri3Q8C460 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Eri3Q8C460 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Eri3Q8C460 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Eri3Q8C460 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Eri3Q8C460 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.79■□□□□ 0.6
Eri3Q8C460 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Eri3Q8C460 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Eri3Q8C460 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Eri3Q8C460 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Eri3Q8C460 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Eri3Q8C460 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.79■□□□□ 0.6
Eri3Q8C460 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.79■□□□□ 0.6
Eri3Q8C460 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.79■□□□□ 0.6
Eri3Q8C460 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Eri3Q8C460 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Eri3Q8C460 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Eri3Q8C460 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Eri3Q8C460 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Eri3Q8C460 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Eri3Q8C460 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Eri3Q8C460 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Eri3Q8C460 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Eri3Q8C460 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Eri3Q8C460 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.78■□□□□ 0.6
Eri3Q8C460 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Eri3Q8C460 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Eri3Q8C460 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Eri3Q8C460 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Eri3Q8C460 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Eri3Q8C460 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.77■□□□□ 0.6
Eri3Q8C460 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.77■□□□□ 0.6
Eri3Q8C460 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Eri3Q8C460 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Eri3Q8C460 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Eri3Q8C460 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Eri3Q8C460 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Eri3Q8C460 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Eri3Q8C460 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.77■□□□□ 0.6
Eri3Q8C460 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Eri3Q8C460 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Eri3Q8C460 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Eri3Q8C460 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Eri3Q8C460 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Eri3Q8C460 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Eri3Q8C460 Gm12821-201ENSMUST00000120022 600 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms