Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.37■■□□□ 1.33
Usp44Q8C2S0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Usp44Q8C2S0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Usp44Q8C2S0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Usp44Q8C2S0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Usp44Q8C2S0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Usp44Q8C2S0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Usp44Q8C2S0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Usp44Q8C2S0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Usp44Q8C2S0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Usp44Q8C2S0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC23.36■■□□□ 1.33
Usp44Q8C2S0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Usp44Q8C2S0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Usp44Q8C2S0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Usp44Q8C2S0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Usp44Q8C2S0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Usp44Q8C2S0 Gm12821-201ENSMUST00000120022 600 ntBASIC23.35■■□□□ 1.33
Usp44Q8C2S0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Usp44Q8C2S0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Usp44Q8C2S0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Usp44Q8C2S0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Usp44Q8C2S0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Usp44Q8C2S0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Usp44Q8C2S0 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.34■■□□□ 1.33
Usp44Q8C2S0 Spcs1-204ENSMUST00000226782 949 ntBASIC23.34■■□□□ 1.33
Usp44Q8C2S0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC23.34■■□□□ 1.33
Usp44Q8C2S0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Usp44Q8C2S0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Usp44Q8C2S0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Usp44Q8C2S0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC23.33■■□□□ 1.33
Usp44Q8C2S0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.33■■□□□ 1.32
Usp44Q8C2S0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Usp44Q8C2S0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC23.33■■□□□ 1.32
Usp44Q8C2S0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Usp44Q8C2S0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
Usp44Q8C2S0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Usp44Q8C2S0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Usp44Q8C2S0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Usp44Q8C2S0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Usp44Q8C2S0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Usp44Q8C2S0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Usp44Q8C2S0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Usp44Q8C2S0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Usp44Q8C2S0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Usp44Q8C2S0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Usp44Q8C2S0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Usp44Q8C2S0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Usp44Q8C2S0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Usp44Q8C2S0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Usp44Q8C2S0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Usp44Q8C2S0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Usp44Q8C2S0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Usp44Q8C2S0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Usp44Q8C2S0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.3■■□□□ 1.32
Usp44Q8C2S0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Usp44Q8C2S0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Usp44Q8C2S0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Usp44Q8C2S0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Usp44Q8C2S0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Usp44Q8C2S0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
Usp44Q8C2S0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Usp44Q8C2S0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Usp44Q8C2S0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Usp44Q8C2S0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.29■■□□□ 1.32
Usp44Q8C2S0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Usp44Q8C2S0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp44Q8C2S0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp44Q8C2S0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Usp44Q8C2S0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Usp44Q8C2S0 Mir7075-201ENSMUST00000184187 82 ntBASIC23.28■■□□□ 1.32
Usp44Q8C2S0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.28■■□□□ 1.32
Usp44Q8C2S0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp44Q8C2S0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.28■■□□□ 1.32
Usp44Q8C2S0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp44Q8C2S0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Usp44Q8C2S0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.27■■□□□ 1.32
Usp44Q8C2S0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC23.27■■□□□ 1.32
Usp44Q8C2S0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
Usp44Q8C2S0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC23.27■■□□□ 1.32
Usp44Q8C2S0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Usp44Q8C2S0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Usp44Q8C2S0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Usp44Q8C2S0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.26■■□□□ 1.31
Usp44Q8C2S0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp44Q8C2S0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp44Q8C2S0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Usp44Q8C2S0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Usp44Q8C2S0 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.26■■□□□ 1.31
Usp44Q8C2S0 Gm45417-201ENSMUST00000209533 758 ntBASIC23.26■■□□□ 1.31
Usp44Q8C2S0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp44Q8C2S0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Usp44Q8C2S0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp44Q8C2S0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.26■■□□□ 1.31
Usp44Q8C2S0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp44Q8C2S0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp44Q8C2S0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp44Q8C2S0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp44Q8C2S0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp44Q8C2S0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp44Q8C2S0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms