Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.49■□□□□ 0.23
Tsen54Q8C2A2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tsen54Q8C2A2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tsen54Q8C2A2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tsen54Q8C2A2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Gm43566-201ENSMUST00000196851 808 ntBASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tsen54Q8C2A2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tsen54Q8C2A2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tsen54Q8C2A2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tsen54Q8C2A2 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.47■□□□□ 0.23
Tsen54Q8C2A2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Tsen54Q8C2A2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tsen54Q8C2A2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tsen54Q8C2A2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tsen54Q8C2A2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tsen54Q8C2A2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tsen54Q8C2A2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.47■□□□□ 0.23
Tsen54Q8C2A2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tsen54Q8C2A2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tsen54Q8C2A2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Tsen54Q8C2A2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tsen54Q8C2A2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tsen54Q8C2A2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tsen54Q8C2A2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tsen54Q8C2A2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tsen54Q8C2A2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.46■□□□□ 0.23
Tsen54Q8C2A2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tsen54Q8C2A2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tsen54Q8C2A2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tsen54Q8C2A2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tsen54Q8C2A2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Tsen54Q8C2A2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.45■□□□□ 0.22
Tsen54Q8C2A2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tsen54Q8C2A2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tsen54Q8C2A2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tsen54Q8C2A2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tsen54Q8C2A2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tsen54Q8C2A2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tsen54Q8C2A2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Tsen54Q8C2A2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.45■□□□□ 0.22
Tsen54Q8C2A2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Tsen54Q8C2A2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tsen54Q8C2A2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Tsen54Q8C2A2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tsen54Q8C2A2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Tsen54Q8C2A2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tsen54Q8C2A2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tsen54Q8C2A2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Tsen54Q8C2A2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tsen54Q8C2A2 Golph3-205ENSMUST00000228671 2842 ntBASIC16.44■□□□□ 0.22
Tsen54Q8C2A2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tsen54Q8C2A2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tsen54Q8C2A2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tsen54Q8C2A2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.44■□□□□ 0.22
Tsen54Q8C2A2 Gm13238-201ENSMUST00000117655 780 ntBASIC16.44■□□□□ 0.22
Tsen54Q8C2A2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Tsen54Q8C2A2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.44■□□□□ 0.22
Tsen54Q8C2A2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tsen54Q8C2A2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tsen54Q8C2A2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Tsen54Q8C2A2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Tsen54Q8C2A2 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.43■□□□□ 0.22
Tsen54Q8C2A2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.43■□□□□ 0.22
Tsen54Q8C2A2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tsen54Q8C2A2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Tsen54Q8C2A2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Tsen54Q8C2A2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Tsen54Q8C2A2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Tsen54Q8C2A2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Tsen54Q8C2A2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Tsen54Q8C2A2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tsen54Q8C2A2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tsen54Q8C2A2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tsen54Q8C2A2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Tsen54Q8C2A2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tsen54Q8C2A2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tsen54Q8C2A2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tsen54Q8C2A2 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.42■□□□□ 0.22
Tsen54Q8C2A2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tsen54Q8C2A2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tsen54Q8C2A2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tsen54Q8C2A2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tsen54Q8C2A2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tsen54Q8C2A2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms