Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm42569-201ENSMUST00000200539 472 ntBASIC20.17■□□□□ 0.82
Sh3rf2Q8BZT2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3rf2Q8BZT2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3rf2Q8BZT2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Sh3rf2Q8BZT2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3rf2Q8BZT2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3rf2Q8BZT2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3rf2Q8BZT2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Sh3rf2Q8BZT2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Sh3rf2Q8BZT2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3rf2Q8BZT2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3rf2Q8BZT2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3rf2Q8BZT2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Sh3rf2Q8BZT2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Sh3rf2Q8BZT2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.15■□□□□ 0.82
Sh3rf2Q8BZT2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Sh3rf2Q8BZT2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3rf2Q8BZT2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3rf2Q8BZT2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3rf2Q8BZT2 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.14■□□□□ 0.82
Sh3rf2Q8BZT2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3rf2Q8BZT2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3rf2Q8BZT2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3rf2Q8BZT2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.14■□□□□ 0.81
Sh3rf2Q8BZT2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3rf2Q8BZT2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.13■□□□□ 0.81
Sh3rf2Q8BZT2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3rf2Q8BZT2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3rf2Q8BZT2 Gm7291-201ENSMUST00000199147 382 ntBASIC20.13■□□□□ 0.81
Sh3rf2Q8BZT2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3rf2Q8BZT2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3rf2Q8BZT2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3rf2Q8BZT2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3rf2Q8BZT2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3rf2Q8BZT2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.12■□□□□ 0.81
Sh3rf2Q8BZT2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3rf2Q8BZT2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.12■□□□□ 0.81
Sh3rf2Q8BZT2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3rf2Q8BZT2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3rf2Q8BZT2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3rf2Q8BZT2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3rf2Q8BZT2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3rf2Q8BZT2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3rf2Q8BZT2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3rf2Q8BZT2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3rf2Q8BZT2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.11■□□□□ 0.81
Sh3rf2Q8BZT2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.11■□□□□ 0.81
Sh3rf2Q8BZT2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.11■□□□□ 0.81
Sh3rf2Q8BZT2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3rf2Q8BZT2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Sh3rf2Q8BZT2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3rf2Q8BZT2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3rf2Q8BZT2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3rf2Q8BZT2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3rf2Q8BZT2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3rf2Q8BZT2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3rf2Q8BZT2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Sh3rf2Q8BZT2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3rf2Q8BZT2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3rf2Q8BZT2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3rf2Q8BZT2 Gm18671-201ENSMUST00000214826 683 ntBASIC20.1■□□□□ 0.81
Sh3rf2Q8BZT2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Sh3rf2Q8BZT2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3rf2Q8BZT2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Sh3rf2Q8BZT2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3rf2Q8BZT2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3rf2Q8BZT2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3rf2Q8BZT2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3rf2Q8BZT2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Sh3rf2Q8BZT2 Gm10849-201ENSMUST00000100397 618 ntBASIC20.09■□□□□ 0.81
Sh3rf2Q8BZT2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.09■□□□□ 0.81
Sh3rf2Q8BZT2 Gm27405-201ENSMUST00000184201 112 ntBASIC20.09■□□□□ 0.81
Sh3rf2Q8BZT2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3rf2Q8BZT2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
Sh3rf2Q8BZT2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Sh3rf2Q8BZT2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Sh3rf2Q8BZT2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3rf2Q8BZT2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3rf2Q8BZT2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3rf2Q8BZT2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3rf2Q8BZT2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3rf2Q8BZT2 Gm42778-201ENSMUST00000199644 553 ntBASIC20.08■□□□□ 0.81
Sh3rf2Q8BZT2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3rf2Q8BZT2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Sh3rf2Q8BZT2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sh3rf2Q8BZT2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Sh3rf2Q8BZT2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Sh3rf2Q8BZT2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sh3rf2Q8BZT2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sh3rf2Q8BZT2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Sh3rf2Q8BZT2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Sh3rf2Q8BZT2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sh3rf2Q8BZT2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.07■□□□□ 0.8
Sh3rf2Q8BZT2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3rf2Q8BZT2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3rf2Q8BZT2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3rf2Q8BZT2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3rf2Q8BZT2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.07■□□□□ 0.8
Sh3rf2Q8BZT2 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.07■□□□□ 0.8
Sh3rf2Q8BZT2 Gm10033-202ENSMUST00000211874 928 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms