Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3dQ8BX13 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3dQ8BX13 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3dQ8BX13 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3dQ8BX13 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3dQ8BX13 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3dQ8BX13 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3dQ8BX13 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3dQ8BX13 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3dQ8BX13 Gm45417-201ENSMUST00000209533 758 ntBASIC17.54■□□□□ 0.4
Ube3dQ8BX13 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3dQ8BX13 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3dQ8BX13 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ube3dQ8BX13 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ube3dQ8BX13 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.53■□□□□ 0.4
Ube3dQ8BX13 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ube3dQ8BX13 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3dQ8BX13 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3dQ8BX13 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3dQ8BX13 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.53■□□□□ 0.4
Ube3dQ8BX13 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3dQ8BX13 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ube3dQ8BX13 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3dQ8BX13 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3dQ8BX13 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3dQ8BX13 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3dQ8BX13 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3dQ8BX13 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ube3dQ8BX13 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.52■□□□□ 0.4
Ube3dQ8BX13 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ube3dQ8BX13 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3dQ8BX13 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3dQ8BX13 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3dQ8BX13 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3dQ8BX13 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ube3dQ8BX13 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.51■□□□□ 0.39
Ube3dQ8BX13 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.51■□□□□ 0.39
Ube3dQ8BX13 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.51■□□□□ 0.39
Ube3dQ8BX13 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3dQ8BX13 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.51■□□□□ 0.39
Ube3dQ8BX13 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3dQ8BX13 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3dQ8BX13 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3dQ8BX13 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3dQ8BX13 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3dQ8BX13 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3dQ8BX13 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3dQ8BX13 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3dQ8BX13 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3dQ8BX13 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3dQ8BX13 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.49■□□□□ 0.39
Ube3dQ8BX13 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3dQ8BX13 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3dQ8BX13 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.49■□□□□ 0.39
Ube3dQ8BX13 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3dQ8BX13 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.49■□□□□ 0.39
Ube3dQ8BX13 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.48■□□□□ 0.39
Ube3dQ8BX13 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3dQ8BX13 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ube3dQ8BX13 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3dQ8BX13 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Ube3dQ8BX13 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3dQ8BX13 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3dQ8BX13 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.48■□□□□ 0.39
Ube3dQ8BX13 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3dQ8BX13 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3dQ8BX13 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3dQ8BX13 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Ube3dQ8BX13 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3dQ8BX13 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.48■□□□□ 0.39
Ube3dQ8BX13 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3dQ8BX13 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.48■□□□□ 0.39
Ube3dQ8BX13 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ube3dQ8BX13 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ube3dQ8BX13 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms