Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr3Q8BL00 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdhr3Q8BL00 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr3Q8BL00 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.29■□□□□ 0.36
Cdhr3Q8BL00 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr3Q8BL00 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdhr3Q8BL00 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr3Q8BL00 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr3Q8BL00 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr3Q8BL00 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr3Q8BL00 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr3Q8BL00 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdhr3Q8BL00 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdhr3Q8BL00 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cdhr3Q8BL00 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr3Q8BL00 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr3Q8BL00 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr3Q8BL00 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr3Q8BL00 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr3Q8BL00 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdhr3Q8BL00 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdhr3Q8BL00 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr3Q8BL00 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr3Q8BL00 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr3Q8BL00 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cdhr3Q8BL00 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdhr3Q8BL00 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdhr3Q8BL00 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cdhr3Q8BL00 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr3Q8BL00 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr3Q8BL00 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr3Q8BL00 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr3Q8BL00 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr3Q8BL00 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr3Q8BL00 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr3Q8BL00 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr3Q8BL00 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cdhr3Q8BL00 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cdhr3Q8BL00 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr3Q8BL00 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdhr3Q8BL00 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdhr3Q8BL00 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdhr3Q8BL00 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdhr3Q8BL00 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Cdhr3Q8BL00 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdhr3Q8BL00 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdhr3Q8BL00 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cdhr3Q8BL00 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdhr3Q8BL00 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdhr3Q8BL00 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cdhr3Q8BL00 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdhr3Q8BL00 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdhr3Q8BL00 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdhr3Q8BL00 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdhr3Q8BL00 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdhr3Q8BL00 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cdhr3Q8BL00 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cdhr3Q8BL00 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdhr3Q8BL00 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdhr3Q8BL00 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdhr3Q8BL00 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Cdhr3Q8BL00 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.25■□□□□ 0.35
Cdhr3Q8BL00 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdhr3Q8BL00 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdhr3Q8BL00 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdhr3Q8BL00 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdhr3Q8BL00 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdhr3Q8BL00 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cdhr3Q8BL00 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdhr3Q8BL00 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cdhr3Q8BL00 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdhr3Q8BL00 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cdhr3Q8BL00 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdhr3Q8BL00 Mir6236-201ENSMUST00000184437 123 ntBASIC17.24■□□□□ 0.35
Cdhr3Q8BL00 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdhr3Q8BL00 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cdhr3Q8BL00 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdhr3Q8BL00 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdhr3Q8BL00 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.23■□□□□ 0.35
Cdhr3Q8BL00 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdhr3Q8BL00 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdhr3Q8BL00 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdhr3Q8BL00 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.23■□□□□ 0.35
Cdhr3Q8BL00 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.23■□□□□ 0.35
Cdhr3Q8BL00 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdhr3Q8BL00 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdhr3Q8BL00 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdhr3Q8BL00 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cdhr3Q8BL00 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdhr3Q8BL00 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdhr3Q8BL00 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdhr3Q8BL00 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdhr3Q8BL00 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdhr3Q8BL00 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Cdhr3Q8BL00 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdhr3Q8BL00 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdhr3Q8BL00 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Cdhr3Q8BL00 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdhr3Q8BL00 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdhr3Q8BL00 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms