Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smg1Q8BKX6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smg1Q8BKX6 Gm715-201ENSMUST00000117865 831 ntBASIC17.05■□□□□ 0.32
Smg1Q8BKX6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smg1Q8BKX6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smg1Q8BKX6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smg1Q8BKX6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Smg1Q8BKX6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smg1Q8BKX6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smg1Q8BKX6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smg1Q8BKX6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.05■□□□□ 0.32
Smg1Q8BKX6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.04■□□□□ 0.32
Smg1Q8BKX6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smg1Q8BKX6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smg1Q8BKX6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smg1Q8BKX6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smg1Q8BKX6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Smg1Q8BKX6 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.03■□□□□ 0.32
Smg1Q8BKX6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.03■□□□□ 0.32
Smg1Q8BKX6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.03■□□□□ 0.32
Smg1Q8BKX6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.03■□□□□ 0.32
Smg1Q8BKX6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smg1Q8BKX6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smg1Q8BKX6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smg1Q8BKX6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smg1Q8BKX6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smg1Q8BKX6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smg1Q8BKX6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smg1Q8BKX6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.03■□□□□ 0.32
Smg1Q8BKX6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smg1Q8BKX6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.02■□□□□ 0.32
Smg1Q8BKX6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Smg1Q8BKX6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smg1Q8BKX6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.02■□□□□ 0.32
Smg1Q8BKX6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smg1Q8BKX6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Smg1Q8BKX6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Smg1Q8BKX6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smg1Q8BKX6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smg1Q8BKX6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.01■□□□□ 0.31
Smg1Q8BKX6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Smg1Q8BKX6 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.01■□□□□ 0.31
Smg1Q8BKX6 Gm11421-201ENSMUST00000122124 294 ntBASIC17.01■□□□□ 0.31
Smg1Q8BKX6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smg1Q8BKX6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smg1Q8BKX6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smg1Q8BKX6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smg1Q8BKX6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smg1Q8BKX6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.01■□□□□ 0.31
Smg1Q8BKX6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Smg1Q8BKX6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smg1Q8BKX6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Smg1Q8BKX6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17■□□□□ 0.31
Smg1Q8BKX6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17■□□□□ 0.31
Smg1Q8BKX6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17■□□□□ 0.31
Smg1Q8BKX6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smg1Q8BKX6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smg1Q8BKX6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smg1Q8BKX6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Smg1Q8BKX6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Smg1Q8BKX6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17■□□□□ 0.31
Smg1Q8BKX6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17■□□□□ 0.31
Smg1Q8BKX6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.99■□□□□ 0.31
Smg1Q8BKX6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smg1Q8BKX6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.99■□□□□ 0.31
Smg1Q8BKX6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smg1Q8BKX6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Smg1Q8BKX6 Gm15565-201ENSMUST00000118890 427 ntBASIC16.99■□□□□ 0.31
Smg1Q8BKX6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.99■□□□□ 0.31
Smg1Q8BKX6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.99■□□□□ 0.31
Smg1Q8BKX6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smg1Q8BKX6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smg1Q8BKX6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smg1Q8BKX6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smg1Q8BKX6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smg1Q8BKX6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smg1Q8BKX6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smg1Q8BKX6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smg1Q8BKX6 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.98■□□□□ 0.31
Smg1Q8BKX6 Gm9988-201ENSMUST00000069786 435 ntBASIC16.98■□□□□ 0.31
Smg1Q8BKX6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smg1Q8BKX6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smg1Q8BKX6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smg1Q8BKX6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.98■□□□□ 0.31
Smg1Q8BKX6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smg1Q8BKX6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smg1Q8BKX6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smg1Q8BKX6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smg1Q8BKX6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smg1Q8BKX6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smg1Q8BKX6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smg1Q8BKX6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.97■□□□□ 0.31
Smg1Q8BKX6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smg1Q8BKX6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.97■□□□□ 0.31
Smg1Q8BKX6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smg1Q8BKX6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smg1Q8BKX6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.97■□□□□ 0.31
Smg1Q8BKX6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Smg1Q8BKX6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smg1Q8BKX6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms