Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.17■□□□□ 0.34
Srrm4Q8BKA3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srrm4Q8BKA3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Srrm4Q8BKA3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.17■□□□□ 0.34
Srrm4Q8BKA3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srrm4Q8BKA3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Srrm4Q8BKA3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.17■□□□□ 0.34
Srrm4Q8BKA3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Srrm4Q8BKA3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srrm4Q8BKA3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.17■□□□□ 0.34
Srrm4Q8BKA3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Srrm4Q8BKA3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srrm4Q8BKA3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Srrm4Q8BKA3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srrm4Q8BKA3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srrm4Q8BKA3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Srrm4Q8BKA3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.16■□□□□ 0.34
Srrm4Q8BKA3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.16■□□□□ 0.34
Srrm4Q8BKA3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srrm4Q8BKA3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Srrm4Q8BKA3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srrm4Q8BKA3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srrm4Q8BKA3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Srrm4Q8BKA3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.16■□□□□ 0.34
Srrm4Q8BKA3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srrm4Q8BKA3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Srrm4Q8BKA3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srrm4Q8BKA3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Srrm4Q8BKA3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srrm4Q8BKA3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srrm4Q8BKA3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srrm4Q8BKA3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.15■□□□□ 0.34
Srrm4Q8BKA3 Gm43137-201ENSMUST00000198052 594 ntBASIC17.15■□□□□ 0.34
Srrm4Q8BKA3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Srrm4Q8BKA3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Srrm4Q8BKA3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Srrm4Q8BKA3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srrm4Q8BKA3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Srrm4Q8BKA3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.14■□□□□ 0.33
Srrm4Q8BKA3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srrm4Q8BKA3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srrm4Q8BKA3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.14■□□□□ 0.33
Srrm4Q8BKA3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Srrm4Q8BKA3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Srrm4Q8BKA3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srrm4Q8BKA3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srrm4Q8BKA3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Srrm4Q8BKA3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srrm4Q8BKA3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Srrm4Q8BKA3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Srrm4Q8BKA3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srrm4Q8BKA3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm4Q8BKA3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm4Q8BKA3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm4Q8BKA3 Gm45417-201ENSMUST00000209533 758 ntBASIC17.13■□□□□ 0.33
Srrm4Q8BKA3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm4Q8BKA3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm4Q8BKA3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm4Q8BKA3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm4Q8BKA3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm4Q8BKA3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srrm4Q8BKA3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm4Q8BKA3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.12■□□□□ 0.33
Srrm4Q8BKA3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.12■□□□□ 0.33
Srrm4Q8BKA3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm4Q8BKA3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm4Q8BKA3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm4Q8BKA3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm4Q8BKA3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.12■□□□□ 0.33
Srrm4Q8BKA3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm4Q8BKA3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm4Q8BKA3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm4Q8BKA3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srrm4Q8BKA3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Srrm4Q8BKA3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm4Q8BKA3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm4Q8BKA3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.11■□□□□ 0.33
Srrm4Q8BKA3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
Srrm4Q8BKA3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
Srrm4Q8BKA3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm4Q8BKA3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm4Q8BKA3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Srrm4Q8BKA3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Srrm4Q8BKA3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm4Q8BKA3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Srrm4Q8BKA3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm4Q8BKA3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm4Q8BKA3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm4Q8BKA3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm4Q8BKA3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Srrm4Q8BKA3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Srrm4Q8BKA3 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.1■□□□□ 0.33
Srrm4Q8BKA3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Srrm4Q8BKA3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Srrm4Q8BKA3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srrm4Q8BKA3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Srrm4Q8BKA3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srrm4Q8BKA3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srrm4Q8BKA3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srrm4Q8BKA3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms