Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.23■□□□□ 0.83
Chmp2bQ8BJF9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp2bQ8BJF9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.23■□□□□ 0.83
Chmp2bQ8BJF9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp2bQ8BJF9 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.23■□□□□ 0.83
Chmp2bQ8BJF9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp2bQ8BJF9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp2bQ8BJF9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp2bQ8BJF9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp2bQ8BJF9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Chmp2bQ8BJF9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp2bQ8BJF9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp2bQ8BJF9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp2bQ8BJF9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Chmp2bQ8BJF9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp2bQ8BJF9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Chmp2bQ8BJF9 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.21■□□□□ 0.83
Chmp2bQ8BJF9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp2bQ8BJF9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp2bQ8BJF9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp2bQ8BJF9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp2bQ8BJF9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp2bQ8BJF9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
Chmp2bQ8BJF9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp2bQ8BJF9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp2bQ8BJF9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp2bQ8BJF9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp2bQ8BJF9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp2bQ8BJF9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp2bQ8BJF9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.19■□□□□ 0.82
Chmp2bQ8BJF9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp2bQ8BJF9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp2bQ8BJF9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp2bQ8BJF9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp2bQ8BJF9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.19■□□□□ 0.82
Chmp2bQ8BJF9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.18■□□□□ 0.82
Chmp2bQ8BJF9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp2bQ8BJF9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.18■□□□□ 0.82
Chmp2bQ8BJF9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.18■□□□□ 0.82
Chmp2bQ8BJF9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Chmp2bQ8BJF9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.18■□□□□ 0.82
Chmp2bQ8BJF9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp2bQ8BJF9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp2bQ8BJF9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Chmp2bQ8BJF9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp2bQ8BJF9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.17■□□□□ 0.82
Chmp2bQ8BJF9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Chmp2bQ8BJF9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp2bQ8BJF9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Chmp2bQ8BJF9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp2bQ8BJF9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Chmp2bQ8BJF9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp2bQ8BJF9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp2bQ8BJF9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp2bQ8BJF9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp2bQ8BJF9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.16■□□□□ 0.82
Chmp2bQ8BJF9 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.16■□□□□ 0.82
Chmp2bQ8BJF9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp2bQ8BJF9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp2bQ8BJF9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp2bQ8BJF9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp2bQ8BJF9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp2bQ8BJF9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp2bQ8BJF9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Chmp2bQ8BJF9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Chmp2bQ8BJF9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp2bQ8BJF9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp2bQ8BJF9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Chmp2bQ8BJF9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Chmp2bQ8BJF9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp2bQ8BJF9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp2bQ8BJF9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp2bQ8BJF9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp2bQ8BJF9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Chmp2bQ8BJF9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp2bQ8BJF9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp2bQ8BJF9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp2bQ8BJF9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp2bQ8BJF9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp2bQ8BJF9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Chmp2bQ8BJF9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp2bQ8BJF9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Chmp2bQ8BJF9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp2bQ8BJF9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp2bQ8BJF9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp2bQ8BJF9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Chmp2bQ8BJF9 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.13■□□□□ 0.81
Chmp2bQ8BJF9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp2bQ8BJF9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.13■□□□□ 0.81
Chmp2bQ8BJF9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp2bQ8BJF9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp2bQ8BJF9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp2bQ8BJF9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp2bQ8BJF9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp2bQ8BJF9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp2bQ8BJF9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Chmp2bQ8BJF9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp2bQ8BJF9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp2bQ8BJF9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp2bQ8BJF9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms