Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf38Q8BI21 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
Rnf38Q8BI21 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf38Q8BI21 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.11■□□□□ 0.65
Rnf38Q8BI21 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rnf38Q8BI21 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf38Q8BI21 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rnf38Q8BI21 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rnf38Q8BI21 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf38Q8BI21 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf38Q8BI21 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.1■□□□□ 0.65
Rnf38Q8BI21 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf38Q8BI21 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.1■□□□□ 0.65
Rnf38Q8BI21 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf38Q8BI21 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf38Q8BI21 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf38Q8BI21 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf38Q8BI21 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf38Q8BI21 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Rnf38Q8BI21 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.09■□□□□ 0.65
Rnf38Q8BI21 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf38Q8BI21 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.09■□□□□ 0.65
Rnf38Q8BI21 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.09■□□□□ 0.65
Rnf38Q8BI21 Gm40881-201ENSMUST00000223397 166 ntBASIC19.09■□□□□ 0.65
Rnf38Q8BI21 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf38Q8BI21 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf38Q8BI21 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf38Q8BI21 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf38Q8BI21 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.08■□□□□ 0.65
Rnf38Q8BI21 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf38Q8BI21 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.08■□□□□ 0.64
Rnf38Q8BI21 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf38Q8BI21 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf38Q8BI21 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf38Q8BI21 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.07■□□□□ 0.64
Rnf38Q8BI21 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf38Q8BI21 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf38Q8BI21 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.07■□□□□ 0.64
Rnf38Q8BI21 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf38Q8BI21 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf38Q8BI21 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.07■□□□□ 0.64
Rnf38Q8BI21 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rnf38Q8BI21 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf38Q8BI21 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf38Q8BI21 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Rnf38Q8BI21 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf38Q8BI21 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf38Q8BI21 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf38Q8BI21 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf38Q8BI21 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.06■□□□□ 0.64
Rnf38Q8BI21 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf38Q8BI21 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf38Q8BI21 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf38Q8BI21 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf38Q8BI21 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf38Q8BI21 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rnf38Q8BI21 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf38Q8BI21 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf38Q8BI21 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Rnf38Q8BI21 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf38Q8BI21 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf38Q8BI21 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Rnf38Q8BI21 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf38Q8BI21 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf38Q8BI21 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf38Q8BI21 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.05■□□□□ 0.64
Rnf38Q8BI21 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf38Q8BI21 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Rnf38Q8BI21 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf38Q8BI21 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf38Q8BI21 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf38Q8BI21 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf38Q8BI21 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf38Q8BI21 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.04■□□□□ 0.64
Rnf38Q8BI21 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.04■□□□□ 0.64
Rnf38Q8BI21 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf38Q8BI21 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf38Q8BI21 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf38Q8BI21 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Rnf38Q8BI21 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Rnf38Q8BI21 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.03■□□□□ 0.64
Rnf38Q8BI21 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf38Q8BI21 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf38Q8BI21 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf38Q8BI21 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf38Q8BI21 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf38Q8BI21 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf38Q8BI21 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf38Q8BI21 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf38Q8BI21 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Rnf38Q8BI21 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf38Q8BI21 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf38Q8BI21 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf38Q8BI21 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf38Q8BI21 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf38Q8BI21 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Rnf38Q8BI21 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf38Q8BI21 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf38Q8BI21 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf38Q8BI21 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms