Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.18■■□□□ 1.3
Samm50Q8BGH2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Samm50Q8BGH2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Samm50Q8BGH2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Samm50Q8BGH2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Samm50Q8BGH2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Samm50Q8BGH2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Samm50Q8BGH2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Samm50Q8BGH2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Samm50Q8BGH2 Gm9870-201ENSMUST00000063874 645 ntBASIC23.17■■□□□ 1.3
Samm50Q8BGH2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Samm50Q8BGH2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Samm50Q8BGH2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Samm50Q8BGH2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Samm50Q8BGH2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Samm50Q8BGH2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Samm50Q8BGH2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Samm50Q8BGH2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Samm50Q8BGH2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Samm50Q8BGH2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
Samm50Q8BGH2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC23.16■■□□□ 1.3
Samm50Q8BGH2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Samm50Q8BGH2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Samm50Q8BGH2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Samm50Q8BGH2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Samm50Q8BGH2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Samm50Q8BGH2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Samm50Q8BGH2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
Samm50Q8BGH2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Samm50Q8BGH2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.15■■□□□ 1.3
Samm50Q8BGH2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Samm50Q8BGH2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Samm50Q8BGH2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Samm50Q8BGH2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC23.15■■□□□ 1.3
Samm50Q8BGH2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Samm50Q8BGH2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Samm50Q8BGH2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC23.14■■□□□ 1.29
Samm50Q8BGH2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Samm50Q8BGH2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Samm50Q8BGH2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Samm50Q8BGH2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Samm50Q8BGH2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Samm50Q8BGH2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Samm50Q8BGH2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.13■■□□□ 1.29
Samm50Q8BGH2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC23.13■■□□□ 1.29
Samm50Q8BGH2 Hsf1-204ENSMUST00000226872 2104 ntBASIC23.13■■□□□ 1.29
Samm50Q8BGH2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Samm50Q8BGH2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Samm50Q8BGH2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Samm50Q8BGH2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
Samm50Q8BGH2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Samm50Q8BGH2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC23.12■■□□□ 1.29
Samm50Q8BGH2 Golgb1-201ENSMUST00000023534 498 ntBASIC23.12■■□□□ 1.29
Samm50Q8BGH2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Samm50Q8BGH2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
Samm50Q8BGH2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Samm50Q8BGH2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
Samm50Q8BGH2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Samm50Q8BGH2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Samm50Q8BGH2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Samm50Q8BGH2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
Samm50Q8BGH2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Samm50Q8BGH2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Samm50Q8BGH2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Samm50Q8BGH2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Samm50Q8BGH2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Samm50Q8BGH2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Samm50Q8BGH2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Samm50Q8BGH2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.1■■□□□ 1.29
Samm50Q8BGH2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Samm50Q8BGH2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Samm50Q8BGH2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Samm50Q8BGH2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Samm50Q8BGH2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Samm50Q8BGH2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Samm50Q8BGH2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Samm50Q8BGH2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Samm50Q8BGH2 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.09■■□□□ 1.29
Samm50Q8BGH2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Samm50Q8BGH2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Samm50Q8BGH2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Samm50Q8BGH2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Samm50Q8BGH2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Samm50Q8BGH2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Samm50Q8BGH2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC23.08■■□□□ 1.29
Samm50Q8BGH2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Samm50Q8BGH2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Samm50Q8BGH2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Samm50Q8BGH2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.08■■□□□ 1.29
Samm50Q8BGH2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Samm50Q8BGH2 Gm21956-201ENSMUST00000179946 522 ntBASIC23.08■■□□□ 1.29
Samm50Q8BGH2 Gm7143-201ENSMUST00000222811 859 ntBASIC23.08■■□□□ 1.29
Samm50Q8BGH2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Samm50Q8BGH2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Samm50Q8BGH2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Samm50Q8BGH2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
Samm50Q8BGH2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Samm50Q8BGH2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC23.07■■□□□ 1.28
Samm50Q8BGH2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.07■■□□□ 1.28
Samm50Q8BGH2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.07■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms